| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2230 |
|---|
| Symbol | |
|---|
| ID | 5832315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2477142 |
|---|
| End bp | 2478089 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641368029 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001639696 |
|---|
| Protein GI | 163851653 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.956243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.534293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGGC CCGCCTCGAC TCAGCCGAAG AAGCCATCTC CTCCCTTGAG CCGATTCAAG
AAGATCCTCG ACGTGACGGG CATCGCCGCG CAGCGCTTCG TCGCCCATGA TGGCTGGGCG
ATCGCCAGCC ACATCGCGCT GTCGATGCTG ACCTCGCTGT TTCCGTTCCT GATTCTGCTC
GCGGCGCTCG CCGGCCTGAT CGGCAGCAAG TCGCTGGCGG ACGAGGCCGG CACGCTGATC
TTCGACGCGG TGCCGCGGGA GGTGGCCAAA CCCATCGTCG GCGAGGTGCA CCGCCTGCTC
ACCGAGCAGC GCGGCGGCGT GCTGACCCTG GGCGCGCTGC TGGCGCTCTA CTTCTCGTCG
TCGGGGGTCG AGTCGCTGCG GGTCGGGCTT AACCGCGCCT ACGGCATCCG CGAGGCGCGG
CCGTGGTGGC TCACCCGGCT CGAATCGATC GGCTACGTCG TCTGCGGCGC CCTCGCGATG
CTGGCCTTCG CGCTGCTTGT GGTGCTCGGG CCGCTGATCT GGCGACAGCT CGTCTTCGTC
GCGCCGGGGC TGGAGCCGCT GGCGCTCACC GTCGCCATCG GCCGCATCGG CGTCACCGCC
TTCCTGATCG CGCTGGTGCT GGTGATCGCG CATAAATTCG TCGCGGCCGG GCGCCGGCCG
GTGCTGTCGG TGCTGCCGGG CATCGTCGTG ACGCTGTGCC TGTGGTTCCT CGCCGGCCTC
GGCTTCGGCT ACTATCTCGA CCGCTTCTCG AACGCCTACG CCTCGACCTA CGGGGGCCTC
GCCACGGCGA TGATCTTCCT CGTGTTCCTC TACTGGCTCG CGGCGATGTT CCTGTTCGGC
GGCGAGATCA ACGGCACGGT CATCGCGGCG CGGCGTCAGC GGCTTCAGGC GCGGATGCGG
GCGCGTCAGG CGGAGGCGGT GCGGGTGAGC GCGAATCCGC TGCCGTGA
|
|---|
| Protein sequence | MERPASTQPK KPSPPLSRFK KILDVTGIAA QRFVAHDGWA IASHIALSML TSLFPFLILL
AALAGLIGSK SLADEAGTLI FDAVPREVAK PIVGEVHRLL TEQRGGVLTL GALLALYFSS
SGVESLRVGL NRAYGIREAR PWWLTRLESI GYVVCGALAM LAFALLVVLG PLIWRQLVFV
APGLEPLALT VAIGRIGVTA FLIALVLVIA HKFVAAGRRP VLSVLPGIVV TLCLWFLAGL
GFGYYLDRFS NAYASTYGGL ATAMIFLVFL YWLAAMFLFG GEINGTVIAA RRQRLQARMR
ARQAEAVRVS ANPLP
|
|---|
| |