| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0860 |
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| Symbol | |
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| ID | 5831141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 937677 |
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| End bp | 938363 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641366642 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001638336 |
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| Protein GI | 163850293 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.122274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0405726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATT CCCAAAAGCA CGCCCTGATC GTCGGCGCCT CCCGCGGCCT CGGGCTCGGG
CTGGCCGAGA CCTTCCTGCG GCGCGGCTGG CAGGTCACCG CGACCCGGCG CGGGGCCGCG
CCCGGTCTCG AACGGCTCGC GGCGGAGGGT GTGCGGGTCG AAACCGTCGA TATCGACGAC
GATGCGTCGG TTGCCGCCCT GCACGAACGG ACGAGGCGCG AACAATTCGA TCTCGTCTTC
GTGGTGGCCG GCGTGCTGAT CGAGGCGGAG AAGCCGCTCA ACGCGGTGGC GCGGGCGGTC
CACGCACAGG TCTACCTGAC CAATGCGGTG AGCCCGATCC TGTTCGCGGA CGCCTTTGCC
GGGACCCTTG CACCCGGCGG CACGCTCGCC TTCATGTCCT CGGTGCTCGG CAGCGTCGGC
CTCAACACCG AGGGCGGCTG GGAGAACTAC CGGGCGAGCA AGGCCGCGCT CAACACCAAT
GCCCGGAGCT TCGCGGCGCG CCACGCCGAC CGCGCATTCG GCGTGCTGCT GCTGCATCCG
GGCTGGGTCG CCACCGATAT GGGCGGCAAG GGGGCTGACC TCGACGTGGC GACGAGCGCG
GCCGGGTTGG CGGACGTGAT CGAGGCGAGA GCCGGCCGGA CGGATCTCGC TTTTCTCGAC
CACCGGGGCG AGACGCTGCC CTGGTAG
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| Protein sequence | MSHSQKHALI VGASRGLGLG LAETFLRRGW QVTATRRGAA PGLERLAAEG VRVETVDIDD
DASVAALHER TRREQFDLVF VVAGVLIEAE KPLNAVARAV HAQVYLTNAV SPILFADAFA
GTLAPGGTLA FMSSVLGSVG LNTEGGWENY RASKAALNTN ARSFAARHAD RAFGVLLLHP
GWVATDMGGK GADLDVATSA AGLADVIEAR AGRTDLAFLD HRGETLPW
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