Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4083 |
Symbol | |
ID | 4182783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 4392910 |
End bp | 4394790 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069979 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_676615 |
Protein GI | 110636407 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGG ATTTCTTCGC GCTCACCCGA CGCCGGTTCC TGGAGCTCTC TGGAGCGGCA ATAGCCGCTC CGGTTGCCGG ACGCGTCGCC TTTGCCCAGG TGAACACGGG CACGCCGCTG CATGGGCTGT CGGCCTTCGG CGACCTTAAA TATCCCGCCG GCTTCGAGCA CTTCGATTAT GCGAGCCTGG ATGCGTCGAA GGGCGGCACC TTCAACTTCT CGCCCGGCTA CTGGTTTTAT AACCAGAACG TCCAGACCTT CAACACGCTG AACAGCTTCG TTCGTACGGG TGACGCTCCG CCGCGCATGG AAATGTGCTT CGACTCGCTC ATGATGAGCG CCTGGGATGA GCCGGATGCG GTCTATGGCC TCGTGGCGGA AAGCGTGACG GTCTCCGAAG ACCGAAACAG CTTCACCTTC AAGCTGCGGC AGGAGGCGCG CTTTCATGAC GGGTCGCCGA TCACGGCGGA GGATGTCGCC TTCAGCTACA ATCTCCTCAA GGAGAAGGGC CACCCGACAT TCGCCCTGAC CCTTGCGGAA ATGGCGGCAG CGGAGGCGCT GAACCCGCAG GAATTCCGGC TTTCCTTCAC CGGAAACCAG TCCGAACGCA CGATCCTCGA AGTGGTCGGG TTCCCTATAC TTTCGAAGGC TTCTCTGGAA GGAAAGTCCT TCGGCAGCTC CACCCTCGAA CCGCTGCTCG GGTCAGGACC CTACAAGGTC GGCAATCTGG CCGCCGGGCG GTACATCGAA TACGAGCGTG TGGAGGATGA TTGGGCGCGG GATCACCCGG CACGCCGCGG CCTTTATCAT TTCGATCGCG TTCGGATCGA GTTTTACAGC GATCGGAATG CCGCTTTCGA AGCCTTCAAG AAGGGTGAGA TCTCCTGGCG CGGGGAATTT ACGGCGCGGG TATGGGCCAC GGGATATAAT TTCCCGGCTG TGGAGGATGG CCGCGTTGTC AAACGCGAGT TCCCTTCCGA GCTGCGGCCG TATTTCTATT GCAAGGCGCT CAACCAGCGC CGGGAACGTT TTCGCGATGC GCGCGTACGC GAAGCCATTG CGCTCTGCTT CGATTTCGAA TGGATCAACG AGAACCTGTT TTACGGCCTC TATACCCGGT CCCATTCTCC ATTCGAGCAA TCCCCCTACA AGGCGGAAGG GCTTCCAAGC GAGGAGGAGC TCGCCTTGCT TGAGCCTTTG CGGGGCAAAA TCCCCGATGC CGCATTCGGA GAAGCCGTCA CACAACCCGC TTCCGATGGT TCCGGCCGCG ACAGAGCCAT GCTGCGCCGC GCCCGCGAGC TGTTGGAGGC GGCCGGCTGG CAGGCACGGG ATGGCGTTCT TCACAACGCC GCGGGGGAGA GGTTCACGCT CGAATATCTC GTCAATGACG AGACGTTCCT GCGCGTGGAA CCGAGCTTCA TCGGCAATCT ACGCGCGATC GGAATTGACG CCCGAATGCG CCAGGTGGAC CCGGCTCAAT ATCAATTGCG CCAGGTGAGC TTCGATTTCG ACCTCATCGA AATCGCGTTT TCATTGGGCG CGACCCCCAC CCATGACAGC CTCGTGCAGT TCTTCCATTC GCGCACGGCA AGTGTCGAAG GATCCTACAA CTACGCCGGC ACAGCCGATT CCGCGGTCGA TGCACTGGTC GATGCGGCGG GCAAGGCTCA GACGCGACAA GAATTCACCA TCGCGATGCG GGCGCTTGAT AGGGTCTTGC GCGCCCGACG CGACTGGATT CCAAATTGGC ATGCGGCGAA TCACCGGGTT GCCTATTGGG ACATGTTCGG CTTCAACGAG CCGAAACCCG ATTATTTCTT CCCGGTCGAG GCTCTGTGGT GGTACGACGA GGAAAAGGCC AAAACGATTG GAAAAGCGTA A
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Protein sequence | MTMDFFALTR RRFLELSGAA IAAPVAGRVA FAQVNTGTPL HGLSAFGDLK YPAGFEHFDY ASLDASKGGT FNFSPGYWFY NQNVQTFNTL NSFVRTGDAP PRMEMCFDSL MMSAWDEPDA VYGLVAESVT VSEDRNSFTF KLRQEARFHD GSPITAEDVA FSYNLLKEKG HPTFALTLAE MAAAEALNPQ EFRLSFTGNQ SERTILEVVG FPILSKASLE GKSFGSSTLE PLLGSGPYKV GNLAAGRYIE YERVEDDWAR DHPARRGLYH FDRVRIEFYS DRNAAFEAFK KGEISWRGEF TARVWATGYN FPAVEDGRVV KREFPSELRP YFYCKALNQR RERFRDARVR EAIALCFDFE WINENLFYGL YTRSHSPFEQ SPYKAEGLPS EEELALLEPL RGKIPDAAFG EAVTQPASDG SGRDRAMLRR ARELLEAAGW QARDGVLHNA AGERFTLEYL VNDETFLRVE PSFIGNLRAI GIDARMRQVD PAQYQLRQVS FDFDLIEIAF SLGATPTHDS LVQFFHSRTA SVEGSYNYAG TADSAVDALV DAAGKAQTRQ EFTIAMRALD RVLRARRDWI PNWHAANHRV AYWDMFGFNE PKPDYFFPVE ALWWYDEEKA KTIGKA
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