Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4068 |
Symbol | |
ID | 4181641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4377404 |
End bp | 4379530 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638069964 |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_676600 |
Protein GI | 110636392 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.173161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACAG CCGAGAGCAG TTCTCCCCCC GCGCTGAAAC CGGAGCTTCT CGATCCCACG CACGGCGACT TCAAGCGTAC GATCGAAGGC CGGCTTCTCA TGTGGATCGC CGTGGCCTTC TCTGTATTTC AGATCGGTAC GGCGGCGCAT CTCATCAACC TGCCGAGCCA GATCGTCAGG GCTTTCCACG TGGGATTTCT GCTGCTCCTC GTCTTCCCTG TCGTCGCCTC GGCGAGGAAT GCCGGCCGTC CGGTGAAGGC GCTTGCATGG CTGTTTGCTT TCGCGGGCGT CGCCGTCGCG CTCTATCAGT TCGTGGAATA TGAGCCGCTA ATCCTGCGTG CCGGCTATCC CACGCAGGTC GACATCGTCG TAGGCGTGAT CGCGCTCATC ACCGTCTTCG CCGCGTCTTA TGTTCTGATG GGGCCGCCTC TGCCCATCAT CTCCGGCGCT TTTCTGCTGT ACTGCCTGCT TGGCCAGTAT CTTCCCGCCC CGCTCAACCA CCGCGGCTAT GATTTTTCGC AGGTGATCGA GCATATGGCC TATGGCACGG AGGGGATCTA CGGCATCCCC ATCTATGTCT CGGCCACCTA TATCTTCCTC TTTATTCTCT TTGGCTCTTT CCTTGAGCGT GCCGGCATGA TCCGGCTTTT CACCGACGTC TCGCTCGGGC TCGTCGGCCA TGCCCAAGGC GGGCCTGCCA AGGTCGCCGT CATTACTTCG GCTCTCATGG GCACCATCTC GGGCTCCGGC GTGGCGAACG TGGTCACCAC CGGCCAGTTC ACGATTCCGC TCATGAAGCG CTTCGGATAC CGGCCGGCCT TTGCCGGTGG AGTGGAGGCC ACCGCGTCGA TGGGCGGGCA GATCATGCCG CCCGTGATGG GAGCCGTCGC CTTCATCATG GCGGAGACGC TCGGCATCGA ATATTACGAG GTGGTCAAGG CCGCGATCGT CCCGGCCTTG CTGTATTTCT CCTCGGCCTT CTGGATGGTG CATCTGGAAG CGGGCAAGCG CGGGCTGCAC GGCCTGCCCC GCGCCGAACT GCCTTCGGCG GTCGCTGCGC TGCGCAGAGG CTGGTATTTG ATCCTTCCGC TCGCCGTGCT CGTCTATCTT CTCTTTAGCG GCTATACGCC GCTTTACGCG GGCACGGTCG GCCTGGGGCT TACGATCCTC CTGGTGTTGG GCGGATCGGT GGCGCTTGGC CTGCCCTCCT ATGTTTTGCG CGTCATCTTC TGGGTGGGGC TGGGCCTTGT GGCGGCCAGC TTCTTTCGTT TCGGCATCAA TGTCGTTCTT CTCGCAGGGC TGGCTCTCAT CCTTGCCAAT CTTGCGGTCG AGGGCGGGAT CAAGACGATT GACAATTGTC GCGCGGCACT GGCCGAAGGC GCCAAAGCAG CGCTTCCAGT CGGCGTAGCC TGCGCGATCG TGGGCGTCGT CATTGGCGCC CTGACGCTGA CCGGCGCTGC CAACACCTTC GGGCAGTTTA TCGTCTCGGT TGGCGAAAAG AGCCTCTTCC TGTCGCTCAT CCTGACGATG ATCACCTGCC TCATTCTCGG CATGGGCATC CCGACGATCC CCAATTACAT CATTACCGGT TCGATCGCTG GTCCCGCTTT GCTCGCGCTC GGCGTTCCGC TCATCGTCAG CCACATGTTC GTCTTCTACT TCGGCATCCT GGCCGATCTC ACGCCTCCCG TCGCCCTTGC GTGCTTCGCG GCAAGTCCGA TTGCGCGCGA GAGTGGGCTA AAGATCTCCA TGGAAGCCAT AAAAGTCGCG ACGGCCGGTT TTGTCATTCC GTTTATGGCC GTCTATTCGC CCGTACTAAT GCTCCAGGAT GGCGGGCCGA CTGCAGCCGC CTTCGGATAT CCGTTGGCGG TCGCCTACAT CATCGTAAAA GCAGGCCTTG CGATCGGCCT CTGGGGCGCG GCCGTCATCG GCTACCTGAA CCGCCCGCTT TCCTGGTGGG AGCGGCTCCT TGCCGCAGCA GCGGCCTTCA CGCTGGTTGC AGCCTTGCCG ATAACGGACG AGATCGGCTT TGGTCTTTCG GCCATCCTTC TTGCCATCGT ATTTCTTCGG CGCCAGACCT CGCGAACCAA GCGAGCCGGC TCTGAAAGAG GCAGTGCGGC CGAATGA
|
Protein sequence | MTTAESSSPP ALKPELLDPT HGDFKRTIEG RLLMWIAVAF SVFQIGTAAH LINLPSQIVR AFHVGFLLLL VFPVVASARN AGRPVKALAW LFAFAGVAVA LYQFVEYEPL ILRAGYPTQV DIVVGVIALI TVFAASYVLM GPPLPIISGA FLLYCLLGQY LPAPLNHRGY DFSQVIEHMA YGTEGIYGIP IYVSATYIFL FILFGSFLER AGMIRLFTDV SLGLVGHAQG GPAKVAVITS ALMGTISGSG VANVVTTGQF TIPLMKRFGY RPAFAGGVEA TASMGGQIMP PVMGAVAFIM AETLGIEYYE VVKAAIVPAL LYFSSAFWMV HLEAGKRGLH GLPRAELPSA VAALRRGWYL ILPLAVLVYL LFSGYTPLYA GTVGLGLTIL LVLGGSVALG LPSYVLRVIF WVGLGLVAAS FFRFGINVVL LAGLALILAN LAVEGGIKTI DNCRAALAEG AKAALPVGVA CAIVGVVIGA LTLTGAANTF GQFIVSVGEK SLFLSLILTM ITCLILGMGI PTIPNYIITG SIAGPALLAL GVPLIVSHMF VFYFGILADL TPPVALACFA ASPIARESGL KISMEAIKVA TAGFVIPFMA VYSPVLMLQD GGPTAAAFGY PLAVAYIIVK AGLAIGLWGA AVIGYLNRPL SWWERLLAAA AAFTLVAALP ITDEIGFGLS AILLAIVFLR RQTSRTKRAG SERGSAAE
|
| |