| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3616 |
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| Symbol | |
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| ID | 4181213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3902288 |
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| End bp | 3903109 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069510 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_676150 |
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| Protein GI | 110635942 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.824236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTC AAGTGGCGCA AGGTGCCCGT TTCGCAGAGA AAGTCGTTCT CGTCGTCGGG
GCGGGGCGGC CCAGAGAGGG CTGGAACAAC GGCGGTGCGG CCGCCCGTGC CTATGCCTGC
GAAGGGGCGC AGGTCATCTG CGCAGATCGG GACCTCGAAG CGGCCGAACG CAGCCGCGCG
ATCATCGAGC GGGAAGGCGG GAAAGCTGTC GCAATACGCG TCGATGCCAC CGATCTGAAG
GAGATGGAGG GGCTGACCGC AACTATCCTC GAACGCTTCG GTCGCATTGA TGTGCTTCAT
AACAATATTG GCGTGACCGT GATGGGCGGG CCGGTGGAGC TAAGCGAACC AGACTATCAC
AAAGCGCTCG ACCTCAATCT GGGCACTGTC TACCGTGCTT GCAAAGCGGT GTTGCCAGCC
ATGCTCGATG CTGGGCGCGG CGCTATTGTC AATGTGTCCT CACTCGCCTC GCTAAGGTGG
ACCGGATACG CCTATTTCGC TTACTCGGCG GCTAAGGCTG CCGTGAACCA GGCAACCGTT
TCAATCGCGA TGGAGTATGC CCGCCACGGG ATACGCGCCA ACTGCGTGAT CCCCGGCGCA
ATCGAGACGC CTATGCTCCA GCAGGCAATA GCCAATACCT ATGGCTCGCC GGAGGAAATG
CGCGAAGCAC GCATTGCGAT GGTGCCGATG CGCCGCAATG GGCAGCCCGA GGACGTTGCC
CAGGCTGCGC TTTTCCTCGC CTCCGATGCG GCGCGCTTTA TCACCGGCGT CTGCCTGCCC
GTCGATGGCG GCCAAAGTTG CTCCGCCCGC GCCTTTCCAT GA
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| Protein sequence | MTLQVAQGAR FAEKVVLVVG AGRPREGWNN GGAAARAYAC EGAQVICADR DLEAAERSRA
IIEREGGKAV AIRVDATDLK EMEGLTATIL ERFGRIDVLH NNIGVTVMGG PVELSEPDYH
KALDLNLGTV YRACKAVLPA MLDAGRGAIV NVSSLASLRW TGYAYFAYSA AKAAVNQATV
SIAMEYARHG IRANCVIPGA IETPMLQQAI ANTYGSPEEM REARIAMVPM RRNGQPEDVA
QAALFLASDA ARFITGVCLP VDGGQSCSAR AFP
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