Gene Meso_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3348 
Symbol 
ID4181725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3618802 
End bp3619323 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID638069241 
Productprotein tyrosine phosphatase 
Protein accessionYP_675884 
Protein GI110635676 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC CGCCCCGCAT CGCCATCCTT TTCGTCTGCC TAGGCAATAT CTGCCGCTCG 
CCGCTCGCCG AAGGTGTCTT CCGCACGGTG CTACAGGAGC GGGGATTGGA GCACCTTTTC
CAAATCGATT CGGCCGCTCT TGGCGATTGG CACGTGGGAC AGCCCCCCGA TCCCCGGTCC
GTTGCGGCCG CCCGGCGCAA CGGCATCGAT ACCTCAGGCC AGACCTGCCG GCAGGTGGGC
CCGGAGGACT TTGAACGCTT TGACCTCATC TTCGGCATGG ACCGGGACAA TATCCGCAGA
TTGAGCCGCC TTGCGCCGAA GGAACCCTGC GGGCGCATCC ACCTCTTCCG GCAATACGCG
CTGGATCGAG CCGAAGAGGT CCCGGATCCC TATCATGGAG GCGAAGAGGG CTTCGATGCC
GTTTACCGCA TGATCCGCGA AGCTTCCGAA GCGCTGGCCG ACAAGCTTGC CGACCGCGCG
CTTTCGGTAC GCAACAGCGG CCAGGCCTCC TCCACCACAT AG
 
Protein sequence
MSEPPRIAIL FVCLGNICRS PLAEGVFRTV LQERGLEHLF QIDSAALGDW HVGQPPDPRS 
VAAARRNGID TSGQTCRQVG PEDFERFDLI FGMDRDNIRR LSRLAPKEPC GRIHLFRQYA
LDRAEEVPDP YHGGEEGFDA VYRMIREASE ALADKLADRA LSVRNSGQAS STT