Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2475 |
Symbol | |
ID | 4846203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2453145 |
End bp | 2455025 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640117185 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001048378 |
Protein GI | 126180413 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.732483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCGG AGCAGGACAT CCCGGGGAGA ACCCTACGAA CTCTCAAATT CCGGCCGAAG GGCATGACGA TCACCGAGAT CGCGAAGGCC CTCGGGGCAA ACCGGAACTC GGTCTCGAAG CACCTTGAGG TGATGCAGGC GGCAGGCCAG GTCGAGGCCC GGCTCGTCGG CAACGCCAAG GTCTATTCCG TCACGCAACG CATACCCCTC TCGGCGTTCC TCTGCTTTAC GAAGAACCTG ATCCTGGTTC TCGATGCCGA CCTCACGGTC GTCCAGACCA ACGACCAGTG CCTCGGGGGA TTCGGGCGCC CAAAAGCGGA AATCGTGGGC CGAAACATCC GCGATGCCGA TCTCCCCGTC GTCTCCTCCC CCGAGGCCCT TGCCGTCGTC GAGAGTCTCG ATCGGGAGCA GGTGATCGCC GACATCTCCC ACCGGTGGGA TGACGGCAGC GAGTCTTTCT ACCAGATGCA GGCGATCCCG ACGACGTTCG AGGACGGAGA GAAGGGGTGT ACCATCGTCC TCGAGGATAT CACCGAGCGG AAACAGTATA TCCGGAACAC GATGTTCCTC GCCCGAACGG CGATCGACCT CGTCGATCTG CCGCCGGGCA ACATCTACCA GTACATCATC GATCGGCTTA CGGAACTCGC GCCGGGAACG TTTGCTTACT TCTTCTCCTA CGATGAAGCC GACCGGCAGT TCGTCATGCG GGCGGTCGCG GGCGACGGAT TCCGGGAAGC GTTCACGGAA CTCCTGGGAC GGGACCCCGT CGGCCTGACC CTCCCCGTCG CCCGGGCCTT CGATGCCCCC TTCAACCAGA CCCCGGGGTC GATGCGCAGC CTCCAGGAGT ATGTCCTCCG CCCCGAACTA TCCTCGTGGT CGTTCTACGA CCTCTGCTTT GGGGGGATCC CGGAAGAGGC CTGCGAGGCG ATCCTTACCC AGTTCGGTAT TGCGAAACTG TACACCATGG GGCTGGTCTG GCGGGAGGAG ATCTTCGGCA TCACGGGCAT CTTCCTCCCA CCGGGAAGAG AACTTGAGAA CCGCGAGACG ATCGAGTCGT TCATCCGGCA GGCATCCATC GCCCTCGCCC GGCGGCAGAC CGCCGAGCGG CTCCGGCAGA GCGAGGAACG GTTCCGGGGG ATGGTCGATT CGTCTCCCTT CGGGGTCGCG CTCATCGACC GCGAGAGGCG GTTCGTCTAC GTCAACCGGA GGTTCGTGGA GATCTTCGGC TACGGTCCGG ACGAAGCACC CACGGTCACA GAGTGGACCC GGCTGATCTT TCCGGACGAA GGTCGCCGGC AGGAGGCCAT CGGTGCCTGG CGATCGGATC TCGAGCGCTC GGTCCCGGGC CAGGTCAGGC CCCGGACGTT TACTGTCCGA TGCCGGGACG GGACGAAAAA GACGGTTCTT TCACGCTTCG TAACACTTTG CGACGGGACA GAGTATTCGA CCTGCGAGGA TATCACCGAA GAGACGCGGG CCTACCACCT CCTCGTCGCG GACATCGCCG ACCTGCGGCG GCGGGAGCAG GAACTCCTCA TCAAAGACCA CGCGATAGCC TCCACCCGGC AGGCGGTCGC GCTCCTCGCC CCGGACGGGG TGGTGACCTA CGCGAACGCC ACTTACCTCG CCCTCTGGGG CTACCCGACC GAAGGAGCGG TGCAGGGCTC GCACTTCTCC CGGTTCTGGG TACGGCCGGA CGAGATCCTG GACGTCATCC GGACAGTCAT CGAAGGCCGG TCCTGGCACG GTGAACAGAC CGGCATCCGG AGTGACGGTG CAACGTTCCG GGTGGATCTC CTCGGGACGC CGATCGTCAG CCACGACGGC AGGGTGCTCG GGGTGATGAT GGCAGCGACG TTCCGGAGGA ACGGAGCTTG A
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Protein sequence | MQPEQDIPGR TLRTLKFRPK GMTITEIAKA LGANRNSVSK HLEVMQAAGQ VEARLVGNAK VYSVTQRIPL SAFLCFTKNL ILVLDADLTV VQTNDQCLGG FGRPKAEIVG RNIRDADLPV VSSPEALAVV ESLDREQVIA DISHRWDDGS ESFYQMQAIP TTFEDGEKGC TIVLEDITER KQYIRNTMFL ARTAIDLVDL PPGNIYQYII DRLTELAPGT FAYFFSYDEA DRQFVMRAVA GDGFREAFTE LLGRDPVGLT LPVARAFDAP FNQTPGSMRS LQEYVLRPEL SSWSFYDLCF GGIPEEACEA ILTQFGIAKL YTMGLVWREE IFGITGIFLP PGRELENRET IESFIRQASI ALARRQTAER LRQSEERFRG MVDSSPFGVA LIDRERRFVY VNRRFVEIFG YGPDEAPTVT EWTRLIFPDE GRRQEAIGAW RSDLERSVPG QVRPRTFTVR CRDGTKKTVL SRFVTLCDGT EYSTCEDITE ETRAYHLLVA DIADLRRREQ ELLIKDHAIA STRQAVALLA PDGVVTYANA TYLALWGYPT EGAVQGSHFS RFWVRPDEIL DVIRTVIEGR SWHGEQTGIR SDGATFRVDL LGTPIVSHDG RVLGVMMAAT FRRNGA
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