| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2001 |
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| Symbol | |
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| ID | 4846725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1987175 |
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| End bp | 1988224 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640116707 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001047909 |
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| Protein GI | 126179944 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTA AAGATCTTTT CAATGATTTC TTGAACAGGA GACCTTCGGA TCAGGAGAGG
ATCCCGGAGG ATACTCCGGA TGCCGACCGG TTCGTGGAGC AGGACCAGGA GATCTTCGGC
AGGATTGAGA ACTGGCAGAA GTACCAGGAA GGGTTTTACC GGTTCCTCAA ACACCCGTTC
AGGGTGATGA TGGAGGAGCC CTACACCGTC CTCTTCGTAT CCGTCCCGGT TGCGCTGCTC
CTCTTTATCG GCGGGTTCGT GAGCATGGTG ACGTCCTACG GCATCGGCGC CCTCTTCACG
ACGACGATGA TCGACGACGT CTTCGTCTTC GCGCTCCTCA TTGCCATCGT GCCGCTTGGC
CTTCTCGATT TCAAGGAGGC GTGGCGCGTA TCGAGCGTCG AGGCGTCCCT TCCGAACTTT
TTCCGGGACG TGGCCGGGAT GAACGATTCA GGTATGACGC TCCCGCATGC CATTCATATC
GTCTCGGAGG GCGAATACGG GGCGCTCACA CCGCACATCC GCAAACTCGA CACCGAGATG
TCCTGGGGTG TCCCGTTCGT GGAGGCCATC CGCCGGTTCG GAAAGACCGT GAATACCCCG
CTCGCGGAGC GGAGCGTCGA CCTGATCGCC CACGCGAGCT CCGCCGGCGG TGACGTGAGC
GAGGTGCTGC GGGCGGCGGC ACACGATGCT TACGAGTTCT TCAACTTAAA GACGGAGCGC
AAAAACGGGA TGATGATCTA CATGATCATC ATCCTGATGT CGTTCTTCGT CTTCCTCTTC
GTCATCGGGG TGCTTTCGGG CACCTTCCTC ACCACGATGG CGGAGGCGGG GGAGGCGGTC
TCTGCGTCGG GCTCGAGTTC GGCCCAGTCG TTCATGGGCA ACGTGGACCT CTTCCTCTAC
AACCGGATCT TCTGTCACTC CGCGCTGATT CAGGGATTCT TCTCGGGGCT GGCGGCGGGC
ATCATGGGCG AAGGCCGGGT GGTCGGTGGG CTGAAGTACT CGGCGCTGAT GGTCATGATC
GCCTGGATCG CGTTCCGGTT CATCATCTGA
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| Protein sequence | MGFKDLFNDF LNRRPSDQER IPEDTPDADR FVEQDQEIFG RIENWQKYQE GFYRFLKHPF
RVMMEEPYTV LFVSVPVALL LFIGGFVSMV TSYGIGALFT TTMIDDVFVF ALLIAIVPLG
LLDFKEAWRV SSVEASLPNF FRDVAGMNDS GMTLPHAIHI VSEGEYGALT PHIRKLDTEM
SWGVPFVEAI RRFGKTVNTP LAERSVDLIA HASSAGGDVS EVLRAAAHDA YEFFNLKTER
KNGMMIYMII ILMSFFVFLF VIGVLSGTFL TTMAEAGEAV SASGSSSAQS FMGNVDLFLY
NRIFCHSALI QGFFSGLAAG IMGEGRVVGG LKYSALMVMI AWIAFRFII
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