Gene Memar_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1911 
Symbol 
ID4847445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1907251 
End bp1908000 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640116617 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_001047819 
Protein GI126179854 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCG TCTGCCGCGC CGGCATCCAG ATGACGGGTG ACGGTGCACG CGAGGTTCAC 
GACGACATCA TCGTCGAGGA CCACGTCCGG CTCTTTTTGA ACGGCGAGTT CCTCACGGCG
CTCGTGGCAA GCCCCGACCG CCTGGACGAC CTCGGGGCAG GGTTCGTCGT CTGCGAGGGG
CTGGCGGACT CGGTCGAGTC GGTGGAGGTT GCCGGGAAGG ACGTCCACAT CACCGCACCG
GTGAAAAAGG AGATCCGGCT CGAGACGGAG TCGTCCGGCG GTTCCCGCGT GCTCGGCGAG
CCGGGATCGG TCGCGTCGTC GATCACGATC ACGGCGGACG GCATCCGTGC GGTCACGGCG
GCGATCGAGT CCGACACCTG GCGGAGGACC GGCGGCGTCC ACTGCTCGGT TCTCTTCTGC
GACGGCGAAC TCGTCACCCG GGCGTGCGAT GTGGGGAGGC ACAACACCGT CGACAAGGTC
GTGGGCCATG CGGCCTTAAA GGGGCTCGAC CGGTCGAGGT GCATCCTCGG GTGCACGGGC
CGGCAGCCGG CGGGGATGGT GGCGAAGGCG GCGAACGCGG GGATCCCGAT CGTCGTCTCC
CGCGCCGCCA CGACCGACCG GGGCATCCTC ACGGCGGAGC GCGCGGGTCT CACGCTGGTC
GGCTTCTCGC GGGGGGAGCG GTTCACCATC TACACGCACC CGGAGCGGGT GCCCGAAGTC
CTTGAGCAAC TGGAGAAGAC AAAACGATGA
 
Protein sequence
MEIVCRAGIQ MTGDGAREVH DDIIVEDHVR LFLNGEFLTA LVASPDRLDD LGAGFVVCEG 
LADSVESVEV AGKDVHITAP VKKEIRLETE SSGGSRVLGE PGSVASSITI TADGIRAVTA
AIESDTWRRT GGVHCSVLFC DGELVTRACD VGRHNTVDKV VGHAALKGLD RSRCILGCTG
RQPAGMVAKA ANAGIPIVVS RAATTDRGIL TAERAGLTLV GFSRGERFTI YTHPERVPEV
LEQLEKTKR