| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1846 |
|---|
| Symbol | |
|---|
| ID | 4848159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1841236 |
|---|
| End bp | 1842183 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640116551 |
|---|
| Product | diphthamide biosynthesis protein |
|---|
| Protein accession | YP_001047754 |
|---|
| Protein GI | 126179789 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
|---|
| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATACCTG TCTCTGATCT CATCGAAAGG CTCCGCGAGC GCGGGGCACG GTCGGTCGCC
CTTCAGTTCC CCGCCGGGCT CGCCCGGCAG GCGCCGGGGA CGGCCGCCGC CCTCCGCGAC
GCGGGGTTCG AGGTGGTCGT CAGCGGCGAC CCCTGCTACG GGGGCTGCGA CCTCGCGCTC
GACGCACTCC TATATGCGGA CGTGCTGGTC CACTTCGGCC ACGCGCCGGT CGAGGAGCGC
CCCAACGTCA TCTACGAGCC CGTCCGGTTC GACTTCGACG TAACCGTGCT GGAGAAGGCC
CTTCCTCTTC TCACCGGCCT GCGCGTCGGC CTCGTCACCA CCGTTCAGCA CGTTCACCTG
CTCGGCGCGA TGGCGGCGTT CCTCCGTGAC CACGGCATCG AGGCGGTCGT TGCGCCCGGC
GACGGCCGGA CACCGATCCC CGGGCAGGTG CTCGGGTGCA ACTTCGCCGC CGCACGGGCG
ACGGGGGCGG ATGAGATCCT CTTCGTCGGG ACGGGGGTCT TCCACCCCAT CGGCATCCGG
CTCGCAACCC GGGCCCGTGT GGTGGCGCTC GACCCCTACA CCCGCGAGGC GCAGGAGGTG
GATGCCGACC GCCTGGTCCG CCGCCGCGCC GCGGTGATGG AAAAGGCGCG TGACGCCGCG
AACTACGGGA TCATCGTCAG CACCAAGAGC GGGCAGCAGC GGATGGACCT TGCCCGGCGG
CTCGCTTCTC TCTCGGATCG GGCGTTCCTT GTCGCGATGC GCGAGGTCTC GCCCGCCGAG
ATGCTCGACC TCGGATTCGG GGCTTATGTG AACACCGCCT GCCCCCGGCT CGCCTACGAC
GACCAGATCC GGTTCCCCGT CCCGGTGCTG ACCCCGCCGG AGTTCGAGAT CCTCTGCGGG
GCCCGGGACT GGGACGACTA CACCATCGAC GAGTACCTCG CGCCATGA
|
|---|
| Protein sequence | MIPVSDLIER LRERGARSVA LQFPAGLARQ APGTAAALRD AGFEVVVSGD PCYGGCDLAL
DALLYADVLV HFGHAPVEER PNVIYEPVRF DFDVTVLEKA LPLLTGLRVG LVTTVQHVHL
LGAMAAFLRD HGIEAVVAPG DGRTPIPGQV LGCNFAAARA TGADEILFVG TGVFHPIGIR
LATRARVVAL DPYTREAQEV DADRLVRRRA AVMEKARDAA NYGIIVSTKS GQQRMDLARR
LASLSDRAFL VAMREVSPAE MLDLGFGAYV NTACPRLAYD DQIRFPVPVL TPPEFEILCG
ARDWDDYTID EYLAP
|
|---|
| |