Gene Memar_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1830 
Symbol 
ID4847405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1825154 
End bp1825906 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID640116535 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001047738 
Protein GI126179773 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGG AACCTGTCGA GATCCTGGCC GGCATGGCCG AGCGGGGAGA GGTCGATCCC 
TGGAACATCG ATATCGTGGA CGTGACCGAT CGGTTCCTCG CCGAACTCGA CCGGAGGAAG
GAGCTCGACC TGCGGATCTC GGGGAGGACG CTCTTTTATG CCGCGTGCCT GCTGCGCCTG
AAGTCGGATT ATCTCGACGG CTGGGGCGAA GAAGAAGACG AAGATTCGTT TGCCGACGAT
GAGGACGAGT CGTTTGAGGA TCTCGGGTTC GATTACGAGT CGGCCGGAGA GGTCGAGCCG
ATGGGGCGCC TGGAGCGGGA GATCCAGCGT CGTCTGGGGC GAAAGAACCT GCGGAAACGT
CCGCCGGTCA CGCTCTACGA ACTCATCAAG CAGTTGAAGA CGGCGGAGAA GGAGCAGCGT
CGCAGGCAGC GCAAAAGGGT CTCTGTGCCC AGGGAGCCGG ATCTCAACCT CAGCGCCGGA
GACGTGGTGG CGGTGGCGCA TGACGAAGGA TACCAGGGTG CGGTTGCGGT CGTCATGACG
GAGTTCCAGC GCGCTGCCCG GAACGGTGAT ATCCTGACGC TGGGCGACCT CTCCGGTGCC
ATGGGGCGAA GTCGCCGCGA GGTCTACATC CCGCTCCTCT TCCTGATGCT CGAGGGGAAA
CTCGCGCTCT GGCAGGACGA GTTCTTCGGC GAGATCTATG TCGGCGAGCA GATCCCCGAG
GACGGTCCCG ATGGGGCCGG CGAGGATGCG TGA
 
Protein sequence
MDEEPVEILA GMAERGEVDP WNIDIVDVTD RFLAELDRRK ELDLRISGRT LFYAACLLRL 
KSDYLDGWGE EEDEDSFADD EDESFEDLGF DYESAGEVEP MGRLEREIQR RLGRKNLRKR
PPVTLYELIK QLKTAEKEQR RRQRKRVSVP REPDLNLSAG DVVAVAHDEG YQGAVAVVMT
EFQRAARNGD ILTLGDLSGA MGRSRREVYI PLLFLMLEGK LALWQDEFFG EIYVGEQIPE
DGPDGAGEDA