Gene Memar_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1197 
Symbol 
ID4848320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1172063 
End bp1172905 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID640115887 
Productsignal-transduction protein 
Protein accessionYP_001047110 
Protein GI126179145 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.749795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACCG ACGTCGTCTG CGTCGAGATC CCCGGAAACC GGGACGATGT CCTGCGTATC 
CTGAAACGCA CGGGGATCAG CGGCGTCCCT GTCCTCAAAG ACGGCGAGCT CGTCGGCATC
ATCACCCGTA AGGATCTCCT CCGCAAGGCC GAAGAGACCC AGCTCGGGCT CCTGATGACG
CCCGACCCGG TCGTCATCCG GCCGGACGCC CCCATCTCGG AGGCGGCCCA GCTGATGGTG
CGCCACAACA TCAGGAGGCT TCCCGTCCTC CAGGACGGGA AGATGGTCGG GCTGATCAGC
GTGGCCGATC TCATCGGCGC CGTTGCCCAG CTCCGCATCA CCCTCCCCAT CAAGGAGAAC
TACGTCAGCA AGACCTACGC CCTCTGGGAG GAGACACCCC TCTCGCTCGT CGGGAGAGTC
CTCGAGATCT CGGGTTACGA CGCCATCCCC GTCCTGATGG AGGACGGCAC GCTCACCGGG
ATCATATCGG AGCGGGATCT CATCAGGCAT TCCCGCATCG AGGACGGTGT CGAGGTCAGC
GACTTCTCGA ACGGCACGGA CGATGACGAA TGGACGTGGG AGAGCATCCG GGACATGCAC
ACCATCAGTT ACGGCATCTC CAAGATCCAG CTCCTCCCGA TCCCCGTGAA GAACGCGATG
GTGAAGAACG TCCTCGCCGT CCCCCTGAAC GCCGAGGTCG GCGAATGCGC ACTGAAGATG
CGGCGGGCCC GGGTCGACCA GCTCCCGGTG GTCAACGGGA ACAAGCGGCT TGTCGCCATG
CTCTTCGACC GTGAGCTGAT AAAGGTGCTG CTGCCTGACC AGCAGGCCGT GCGAAAGAAT
TAA
 
Protein sequence
MITDVVCVEI PGNRDDVLRI LKRTGISGVP VLKDGELVGI ITRKDLLRKA EETQLGLLMT 
PDPVVIRPDA PISEAAQLMV RHNIRRLPVL QDGKMVGLIS VADLIGAVAQ LRITLPIKEN
YVSKTYALWE ETPLSLVGRV LEISGYDAIP VLMEDGTLTG IISERDLIRH SRIEDGVEVS
DFSNGTDDDE WTWESIRDMH TISYGISKIQ LLPIPVKNAM VKNVLAVPLN AEVGECALKM
RRARVDQLPV VNGNKRLVAM LFDRELIKVL LPDQQAVRKN