Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1197 |
Symbol | |
ID | 4848320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1172063 |
End bp | 1172905 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640115887 |
Product | signal-transduction protein |
Protein accession | YP_001047110 |
Protein GI | 126179145 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.749795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAACCG ACGTCGTCTG CGTCGAGATC CCCGGAAACC GGGACGATGT CCTGCGTATC CTGAAACGCA CGGGGATCAG CGGCGTCCCT GTCCTCAAAG ACGGCGAGCT CGTCGGCATC ATCACCCGTA AGGATCTCCT CCGCAAGGCC GAAGAGACCC AGCTCGGGCT CCTGATGACG CCCGACCCGG TCGTCATCCG GCCGGACGCC CCCATCTCGG AGGCGGCCCA GCTGATGGTG CGCCACAACA TCAGGAGGCT TCCCGTCCTC CAGGACGGGA AGATGGTCGG GCTGATCAGC GTGGCCGATC TCATCGGCGC CGTTGCCCAG CTCCGCATCA CCCTCCCCAT CAAGGAGAAC TACGTCAGCA AGACCTACGC CCTCTGGGAG GAGACACCCC TCTCGCTCGT CGGGAGAGTC CTCGAGATCT CGGGTTACGA CGCCATCCCC GTCCTGATGG AGGACGGCAC GCTCACCGGG ATCATATCGG AGCGGGATCT CATCAGGCAT TCCCGCATCG AGGACGGTGT CGAGGTCAGC GACTTCTCGA ACGGCACGGA CGATGACGAA TGGACGTGGG AGAGCATCCG GGACATGCAC ACCATCAGTT ACGGCATCTC CAAGATCCAG CTCCTCCCGA TCCCCGTGAA GAACGCGATG GTGAAGAACG TCCTCGCCGT CCCCCTGAAC GCCGAGGTCG GCGAATGCGC ACTGAAGATG CGGCGGGCCC GGGTCGACCA GCTCCCGGTG GTCAACGGGA ACAAGCGGCT TGTCGCCATG CTCTTCGACC GTGAGCTGAT AAAGGTGCTG CTGCCTGACC AGCAGGCCGT GCGAAAGAAT TAA
|
Protein sequence | MITDVVCVEI PGNRDDVLRI LKRTGISGVP VLKDGELVGI ITRKDLLRKA EETQLGLLMT PDPVVIRPDA PISEAAQLMV RHNIRRLPVL QDGKMVGLIS VADLIGAVAQ LRITLPIKEN YVSKTYALWE ETPLSLVGRV LEISGYDAIP VLMEDGTLTG IISERDLIRH SRIEDGVEVS DFSNGTDDDE WTWESIRDMH TISYGISKIQ LLPIPVKNAM VKNVLAVPLN AEVGECALKM RRARVDQLPV VNGNKRLVAM LFDRELIKVL LPDQQAVRKN
|
| |