| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5575 |
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| Symbol | |
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| ID | 7119357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011758 |
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| Strand | + |
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| Start bp | 198365 |
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| End bp | 202102 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643528243 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002424239 |
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| Protein GI | 218533424 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.78848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.241587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ACCACCTCTC GGCTCAGGTC ATCAGCGCAG GCGTCGGCAA GAGTGCCGTC
GCATCCGCGG CCTATCGCCG GGCCACCAAC ATGGTGCGCG AGGCGACCGG CAAGGTTCTG
ACCTACGAGG GCAAGCAGCA CGTCGCGTAC ACCGAGCTGG CTCTGCCGGA GCAGACGCCG
GCGTGGTTCC GCACCGGCAT CGACGGCCGC AGCGAGAATG CCGCCTCGGC CTATCTGTGG
AATGCGGTCG AACGGAAGGA GGGGCTGAAA GGCACCGGCT ACGCGATGGA GATGAACATC
GCGCTCCCGG TCGAACTCAC CCTCGAGCAG AACATCGACC TCGCCCGGGA TTGGATCGAG
AGCGCGATCA CCGCGCAGGG AATGGTCGCC GATTGGGCTC TGCATGATGT GCCGGGCAAC
CCGCACATCC ACGTCATGGT CCCGCTGCGG AGATTCACCG AGAAGGGGTT CGCGACGAAG
TTCGAGGTCG CCCGCGATCG GGATGGCAAC GTGCTCTACC GGGACGACGG CAAGCCCCGC
TACGAGAAGT TGGCCGGGCC GATGAAGCAC CTAGTGCCGT GGCGCCGGTC ATGGGCCGAG
ACGGCCAACC TGCACCTCGC CAAGGCCGGG CTCGACCTGC GCATCGACCA CCGCTCGCAC
ATCGAGGCCG GCATCCGGAT CGAGCCGACC GAGCATATCG GCGTCCATGC CGTGAACATG
GCCGGGCTCG GCAAGGTGTC CGATCGGGTA GAGGCGGAGA AGCAGAAGCG CCTCCGCAAT
GCGCAGGCGA TCATCGATGA TCCCGAGACG CTGCTGCCGA TCCTGTCGCG CGAGAAGAGC
GTGTTCGACG AGCGGGACAT TGCCCGGGCG GTGTTCCGCT ATATCGACGA TCCGGCGGCG
TTCGAGGCGG TGCGCCTGAG GCTCGGACAA TCGCCCGAAC TGGTGGCGGT CGCGGAAGAG
GTGTTCGACA CGGAGAGCGG ACGGGTGGTC GCCCGGGCGC GCTGGACCAC CCGCGCGCTG
CTCGAAGCCG AGGTCAGGAT GCAGGCCGCC ACCGGGCGGC TGTTTGCCGA CACCTCGCAT
CGGGTTCCGG ATCGCGCGCG CGACCGGGCC TTCGCCGCAC GACCCGAGCT GTCCGAGGAG
CAGCGCGAGG CGGTCCGTCA CGTCACAGGC GCGGCTCGGA TCGCGGCCGT GGTCGGGTTT
GCCGGTGCGG GCAAATCGAC CATGCTCGGG GTGGCGCGCG CTGCCTGGAG CGACTGCGGC
CACCGCGTCG TCGGCGGGGC TCTCGCCGGC AAGGCGGCCG AGGGTTTGGA AAGCAGCGCC
GGGATCGCGA GCCGCACTCT GGCCTCGTGG GAGCTGGCCT GGAAGAACGA CCGCGACCTG
CTCAAATCCG GCGACGTGTT CGTGCTCGAC GAGGCCGGCA TGGTCGCCTC GGAGCAGCTC
TCGCGGATCG TTCGGGAAGT GGAGCGGCGC GGGGCCAAGC TGGTGCTGGT CGGCGACGCG
ATGCAACTCC AGCCGATCGA GGCCGGGGCC GGGTTCCGGG CGATCATCGA GATCATCGGA
TACGCCGAAC TCGCAGAGAT CTGGCGCCAG GCCGATCCGG CGATGCGGCG GGCGAGCGTC
GCGTTCGCGC GCGGTGAGAC GGCTGCGGCA CTCGGGGTCT ATCGCGAGCG CGGCATGGTC
CGGTTCACGC CCGACCGGGC GGCGGCGCGC GCGGCCCTGA TCGCCGCCTG GAAGCCGGAT
TACCTCGGCC ATAAGCCCGA CGGGCGGCCG AGCGAGACCC TGATCCTGGC CCAGACCAAC
GCCGACGTTC TGGCGCTCAA CGCCATGGCC CGAGACACCC TGAAGGCGGA TGGCCTGCTC
TCGGGCGAAG CCCGGTTCGT GACCGAGCGC GGCGAGCGGA TGTTCGCCCC CGGCGACCGG
GTGCTGTTCC TCGAAAACGA TCGCGCGCTC GGGGTGAAGA ACGGCATGCT CGCCACCGTC
GAGACGGCGG CGAGCGGGCG GCTCATGGTC CGGCTCGACC GGGACGGGAC CGGCGACGGC
GCGCGGATCG AGGTGCGGGC GGAGCTCTAC CGCAACCTCG ATCACGGCTA CGCCGCGACC
GTGCACAAGA GCCAGGGCGC GACCCTGGAC CGGGTGCATG TGCTGGCCAC GCCTGGCATG
GATCGGCACC TCGCCTACGT GGCGATGACG CGCCATCGCC ATGCGGTGGT GCTGCACGGC
GCGCACGAGG ATTTCATCTC GCCGAGCCGC CGGGCCAAGC TCGGGAAGGC CCCGGCGCAC
GAGGCTCTCG ATACGGCCGC GCTGGCCGGC ATGGCCTGGC GCCTCGGGCG GGATGGGGCC
AAGGCTTCGA CCCTCGACTT CGCCGGCGAT GCCGCCTTTC GCGAGGCGGC GGTGGACCTG
TCTTCGCTCG ACGCCAGGCG GATAGCCCGC GATCTCGGCG CCCTGGCCGG GCGGCTCGAG
GCCGAGGCGC CGACCCCGTC AATCCCGGCT CCAGCAGATC CAGATGCCGT CAGAGTCGAG
CCCGATGGCA CTACAGGATC GGCTGAGGAG GATCTGGCGG TTGCCGGAGC CGTGGCCGCG
CCGATAGGGT CGCCGGCGCT GGCCGTGCTC GAAGCCGCGT TGACGCGGAT GGAGCATTCG
GAGACCGAGA TCGCCGACCG AGTCCGGCCG CAGGATCTGC GCGCGCTCGC CTCCGCTTTC
GCCGAGCGCC GCAACCTCGA CGGCCACGCT GCGCTCACCC CCGCCCTGGT CCGCCGCGCG
CGCGGGATGC TGCGCCAGGC CCAGGCACAC TGGCACCGAC TGCACGGTCT CGCCACCCGC
CTGTCCGAGG CGTGGGGGGC GGTGGTCGCG CGCCATGGGG GCGCCGCGAA CGACAGGGTC
CAGGTCGCCG AGCCGGAGGC CCGGACCGAG GCCGTGCAGG CCCCGGAACC AGCGGCGTCT
CAGGAGCAAA AGGCCCCGCT CGCGCCGTTC CTCGCTGCGG TCGACCTCGG AACCAAGGGC
CTCCGGGCCG CCCTCTATGC GCGCATCGAT CCCGCGCGCG ATCTGAAGTC TGAGACCGAC
TCGCTTCAGC GCTGCCTGCG AACCGCACTC GACAAGCCGG GGCCGGTCTA CGCCGCGATT
CTCGCCGAGC TGCGGCAGCC GGACGAGGTC TACGAGGAGC GGATCGAAGC CCTCCTGTCC
GATCCCGAAC CCCATGGCGG CCTGCGTGGC CGCAAGGGCT GGTTCGTGCC GAAACAGGAC
AAGGAGGAAA GGGCTCGGGC CGAGACCGCG TTCGCGCAGG CCAAGGCCGA GGCGATCGAG
CTCAAGGACC ATTTCGAGGG CGTGGCCGAC GGCTTGCGCC CGGTCGAGGT CGCGTACCGC
CAGCGGCTGA CGATCGCGGT GCCGGGGCTG AGCCCGGCCG CGGCGGCGGC CCTCGCCGAG
GTCGGGCGGT GGACCTCTGG CCGCCCCCTG GATGATCTCG TGGCCGCTGC GGTGGCGACC
CCCGCGCTGC GGGCCGAGGT GATCGCCTTC GCCGAGGCTG TGGGGCGCCG CTTCGGCGCG
AACGGGTCGA TCGGCCACCA CGTGGGGCGC GGCCTGGGAC CCGGGCAACG GCTCGACGAG
GCGGAGCGCG AGATCCTGAC CGGCGGCGGC CTTGTCGCCT CCTATGTCGA GGATGGCTCG
CTGTTCCGGG AGCGCTTCAT GAGCCGGGCG CAGGAGCGCG ATCTGGAGCA GGGCCCCGAT
CTCGGGCTGT CTCTGTGA
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| Protein sequence | MAIYHLSAQV ISAGVGKSAV ASAAYRRATN MVREATGKVL TYEGKQHVAY TELALPEQTP
AWFRTGIDGR SENAASAYLW NAVERKEGLK GTGYAMEMNI ALPVELTLEQ NIDLARDWIE
SAITAQGMVA DWALHDVPGN PHIHVMVPLR RFTEKGFATK FEVARDRDGN VLYRDDGKPR
YEKLAGPMKH LVPWRRSWAE TANLHLAKAG LDLRIDHRSH IEAGIRIEPT EHIGVHAVNM
AGLGKVSDRV EAEKQKRLRN AQAIIDDPET LLPILSREKS VFDERDIARA VFRYIDDPAA
FEAVRLRLGQ SPELVAVAEE VFDTESGRVV ARARWTTRAL LEAEVRMQAA TGRLFADTSH
RVPDRARDRA FAARPELSEE QREAVRHVTG AARIAAVVGF AGAGKSTMLG VARAAWSDCG
HRVVGGALAG KAAEGLESSA GIASRTLASW ELAWKNDRDL LKSGDVFVLD EAGMVASEQL
SRIVREVERR GAKLVLVGDA MQLQPIEAGA GFRAIIEIIG YAELAEIWRQ ADPAMRRASV
AFARGETAAA LGVYRERGMV RFTPDRAAAR AALIAAWKPD YLGHKPDGRP SETLILAQTN
ADVLALNAMA RDTLKADGLL SGEARFVTER GERMFAPGDR VLFLENDRAL GVKNGMLATV
ETAASGRLMV RLDRDGTGDG ARIEVRAELY RNLDHGYAAT VHKSQGATLD RVHVLATPGM
DRHLAYVAMT RHRHAVVLHG AHEDFISPSR RAKLGKAPAH EALDTAALAG MAWRLGRDGA
KASTLDFAGD AAFREAAVDL SSLDARRIAR DLGALAGRLE AEAPTPSIPA PADPDAVRVE
PDGTTGSAEE DLAVAGAVAA PIGSPALAVL EAALTRMEHS ETEIADRVRP QDLRALASAF
AERRNLDGHA ALTPALVRRA RGMLRQAQAH WHRLHGLATR LSEAWGAVVA RHGGAANDRV
QVAEPEARTE AVQAPEPAAS QEQKAPLAPF LAAVDLGTKG LRAALYARID PARDLKSETD
SLQRCLRTAL DKPGPVYAAI LAELRQPDEV YEERIEALLS DPEPHGGLRG RKGWFVPKQD
KEERARAETA FAQAKAEAIE LKDHFEGVAD GLRPVEVAYR QRLTIAVPGL SPAAAAALAE
VGRWTSGRPL DDLVAAAVAT PALRAEVIAF AEAVGRRFGA NGSIGHHVGR GLGPGQRLDE
AEREILTGGG LVASYVEDGS LFRERFMSRA QERDLEQGPD LGLSL
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