Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5564 |
Symbol | |
ID | 7119346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011758 |
Strand | + |
Start bp | 183007 |
End bp | 185286 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643528232 |
Product | ParB domain protein nuclease |
Protein accession | YP_002424228 |
Protein GI | 218533413 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0978774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCC CGAAGGCCAC GCCGAAGAGC ACCCCGAAGA CCGCTGCCCC CGCCGCCAAG ATCACGCTGA CCGAGGCGGC TGCGATCCCG TTCGACAAGC TTACCTTGAG CCAGGCGAAC GTGCGCCGGA TCGCTCAGGG AATGAGCATC GAGGACCTGG CCGAGGACAT CGCCCATCGC GGCCTGTTGC AGTCCTTGAG CGTGCGCCCG ATCCTCGACG CGGCGGGCCA GGAGACCGGC CGCTACGAGG TGCCTGCCGG CGGCCGGCGC TACCGCGCCC TGGAGCACCT CGTGAAGACC CGGCGCATGG CCAAGGGCGT CAAGGTGCCC TGCATCATCC GCGCCGCCGA CAGCCCGATC AGCGCGACCG AGGACTCGAT GGCCGAGAAC GCCATGCGCG AGGCCCTGCA TCCGCTCGAC CAGTTCCGGG CGTTCAAGGC GCTGGCGGAT GCTGGCCTGC CCCCGGCCGA CATCGCCGCC CGGTTCTTCG TCACGGAAAC GATCGTGCGC CAGCGCCTGC GGCTCGCCGG CATCAGCCCG GTGCTGCTCG ACGCCTATGC GGCCGGCGAG CTGACCCTGG AATGCCTGAT GGCCTTCTCG GTCACCGAGG ATGCCGAGCG TCAGGTCAAG GTCTGGGAGG CCCTGTGTCG GCGGGGCGGG GTGAGCAACT GGTCGATCCG GCAGGCGCTG ACCGAGCGCA CGGTGAGCGT CGGTGACGCC CGCGCTGTCT TCGTCGGCGA GGAGGCCTAC ATCGCTGCGG GCGGCACCGT CCTGCGCGAC CTGTTCACGG ATCGCGGCGA CGGCTGGTTC CAGGATGCGG CCCTGCTCGA CCGACTGGCC GAGGCGAAGC TGGCGGAGTT CAGCCAGAGC GTGGCTGCGG AGGGCTGGAA GTGGATCGAG GTCCAACTCA GCCTCGGTCA TAGCCACACC TACGGCCTGC GCACCCTGCG GACCCGCTCC GAGCTCAGCG AGGCCGAGGA GACCGCCTTC GAGGCCGCTG TCGAGGAGTT CGACTCGCTC AATGACCAGT ATGGCTACGG CGAGGAGATC CCCGCCGACG CTGCCGAACG CCTGGCCGCA CTGGAGGAGG AGATCGCCGC GTTCGAGGTG CGCGCCGTGA TCTACGACCC GGCCGACATC GCGATTGCCG GGGCCTTCGT TTCCCTCGAC TACGACGGCC GGTCGACGGT GCGCCGCGGC TACGTCCGGC CGGAGGACGA GCCCGTCGCA GCCCCGGAGG CTGCGGCGGC GGGGGCGACG CAGACCGGGG GTGCGGGCTG CGAGGCCGAC GCCGTCGGTG CGGGTTCCCC GGAGGCGGGG GCGGATGGAC AGACCGTTCG GCCAGAGCCG AGCGTGATGC GCGCGATCAT CACCATCGGC GGCGGATCGA CGGCGTCCAC CCCCACGGCC GAGCCCGAGG AGACCGACCG GCCGCTCTCC GAGCAGCATC GGACCGAGCT GACCAGCTAC CGCACCATCG CCCTGCGCGA GGCTCTGGCC GACGATCCCG AGGCCGCCTT CATCGCGGTC CTGCACGCCA TGGTGATCCG GGTGATCGTC AACGGCTACC GAACCGGCTC CTGCCTTGAG GTGTCGACTA CGTCGAGCCG GGTCGACCAC ACCGTGCAGG GTCTCGACGC CTTCCGGCCG GCGACGTCCC TCGACGCGCG GCGCGAGGCG TGGGCGAAGC GGCTGCCGGA GGAGCACGGG GCGATCTGGG ACTTCCTGAT CGATCTGGCT CCGGAGGCGC GCACCGAGCT GTTCGCGCTC TGCGCGGGCC TGAGCGTCAA CGCGATGCAC GCACCCTACG ACCGGCGCCC CGAGGCGTTG CCGCATGCCG ACCGGCTGGC CCGGCTCGTG GGGCTCGACA TGACCCGCGA CTGGACGCCG ACGGCGGCCA ACTACTTCTC GCGGGTCACG AAGGGCAGGA TCCTGGCGGC TGTGCGCGAG GCCAAGGGCG AGGACGTTGC GCGCCTGCTC GAGGGTTTGA AGAAGGGCGA CATGGCGCGT GAGGCCGAGC GGCTGATGGC CGGCAGCGGC TGGCTGCCTG AACTGCTGCT CACCCCCGGC TTGAGCGCCG AGCCGGCAGC CGGCCAGAGC GAGACCGCGG TATCCGACAA GCCGACGGCG ACTGAGGATG TCGCGCTGCC GACGTTCCTC GGCGAAGCCG CGGAGGAAGC CGCATCCGAG CCCAGCGAGC CGCTTCCGCC CTTCCTCGAC GGCGAGGACG GCTCGGCCGA CGGAGATCCC GACATGGGGT ACGCCATCGC CGCCGAGTGA
|
Protein sequence | MTSPKATPKS TPKTAAPAAK ITLTEAAAIP FDKLTLSQAN VRRIAQGMSI EDLAEDIAHR GLLQSLSVRP ILDAAGQETG RYEVPAGGRR YRALEHLVKT RRMAKGVKVP CIIRAADSPI SATEDSMAEN AMREALHPLD QFRAFKALAD AGLPPADIAA RFFVTETIVR QRLRLAGISP VLLDAYAAGE LTLECLMAFS VTEDAERQVK VWEALCRRGG VSNWSIRQAL TERTVSVGDA RAVFVGEEAY IAAGGTVLRD LFTDRGDGWF QDAALLDRLA EAKLAEFSQS VAAEGWKWIE VQLSLGHSHT YGLRTLRTRS ELSEAEETAF EAAVEEFDSL NDQYGYGEEI PADAAERLAA LEEEIAAFEV RAVIYDPADI AIAGAFVSLD YDGRSTVRRG YVRPEDEPVA APEAAAAGAT QTGGAGCEAD AVGAGSPEAG ADGQTVRPEP SVMRAIITIG GGSTASTPTA EPEETDRPLS EQHRTELTSY RTIALREALA DDPEAAFIAV LHAMVIRVIV NGYRTGSCLE VSTTSSRVDH TVQGLDAFRP ATSLDARREA WAKRLPEEHG AIWDFLIDLA PEARTELFAL CAGLSVNAMH APYDRRPEAL PHADRLARLV GLDMTRDWTP TAANYFSRVT KGRILAAVRE AKGEDVARLL EGLKKGDMAR EAERLMAGSG WLPELLLTPG LSAEPAAGQS ETAVSDKPTA TEDVALPTFL GEAAEEAASE PSEPLPPFLD GEDGSADGDP DMGYAIAAE
|
| |