Gene Mchl_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3792 
Symbol 
ID7116987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4004749 
End bp4005825 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content74% 
IMG OID643526528 
ProductAcyl-CoA dehydrogenase type 2 domain 
Protein accessionYP_002422539 
Protein GI218531723 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.267616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA GCGCCCGCAT CGCGGAGCCC CCTTCGCTCG ACGTCGCCGG GATCGTGCGC 
GAGACCTTGC GCCCGCGCCT CGGCGCGATC GATGCCGGGG AATATCCCGC CGACATCCTG
CGGGCGCTCG GGGCGGCCGG CGCCTATGGG CACCACGCCG ACGGCACGGC GGCGGGGCTG
CTCGCCGCCA TCGACGCGAT GACGGAGGCG GGGCAGGCCT GCCTCTCGAC CGCCTTCTGC
ATGTGGTGCC AGGACGCGCT GGTCTGGTAC CTCGCCCAGG GCGACGAGGC CGGCCCGCGC
CGCCATCTGG CCGCGATCGC CTCGGGCGCG GCGCTCGGCG GCACCGGGCT GTCGAACCCG
ATGAAAGCGT TTTCCGGCAT CGAGCCGCTG GCGCTCCAGG GCGAGCGCGC GGGCGACGGC
TACCGGGTGC GCGGGCGCCT GCCCTGGGTG TCGAACCTTG GTCCGGGCCA GCGCTTCGCC
GGGATCCTCT CGCTGCCCGA CGGGCGTCGG GTGATGGGGC TGTTCGAGGC CGGCGCCGAG
TCTGTCTCGA TCGCGGCCAA TGCCCGTTTC ATTGCGCTCG AAGGCACCGG CACCTACACG
GTGATGATCC GCGACGCGCT CCTGTCCGAC GAAGACGTGA TCACGCACGA TGCTGCCGCC
TTCGTGCCGC GCATCCGCAA CGGTTTCGTT CTGCTCCAGA CCGGGATGGG GCTCGGGCTC
GCCCGCGGAG TCGCGGCGCT GATGCGCGCG GATGCCCGTG GGCGCGCCAA CGCGGCGTTC
CTGCCGCTCG GGCCGGACGC GATCGAGGCG CGGGCGGATG CTCTGCGCGA GCGCGTCGCC
GCCGCGGCAC AAGCGCATGC CGAGGCCGAC CGCGCGACCT TCCTCGAGAC CCTGCGTCTG
CGCCTCGACG TGTCGTGGCT GGCCCTGGAG GCGGCGCAAG CCGCCATGCT CCAGGCGGGC
GCGCGCGGCT ATTTGGAGGG CGCGGAGACG TTCCGGCGCC TGCGTGAGGC GCAGTTCGTG
GCGATCGTCA CGCCGTCGGT GAAGCACATC ACGACGGAGC TCGCGCAGGG CGCCTGA
 
Protein sequence
MAASARIAEP PSLDVAGIVR ETLRPRLGAI DAGEYPADIL RALGAAGAYG HHADGTAAGL 
LAAIDAMTEA GQACLSTAFC MWCQDALVWY LAQGDEAGPR RHLAAIASGA ALGGTGLSNP
MKAFSGIEPL ALQGERAGDG YRVRGRLPWV SNLGPGQRFA GILSLPDGRR VMGLFEAGAE
SVSIAANARF IALEGTGTYT VMIRDALLSD EDVITHDAAA FVPRIRNGFV LLQTGMGLGL
ARGVAALMRA DARGRANAAF LPLGPDAIEA RADALRERVA AAAQAHAEAD RATFLETLRL
RLDVSWLALE AAQAAMLQAG ARGYLEGAET FRRLREAQFV AIVTPSVKHI TTELAQGA