Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2070 |
Symbol | |
ID | 7115854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2170779 |
End bp | 2171420 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643524820 |
Product | thiamine pyrophosphate protein domain protein TPP-binding |
Protein accession | YP_002420845 |
Protein GI | 218530029 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0454462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG AACCCGAAGC ATCCGGCCCG CCGATGACGC GCTACGCCTG CATGCAGCGC CTCGCGGCGC GCCTGCGGGA CGAACTCGTG ATCCTGTCCC TCGGGGGCAG CGTGGACGAG TGGTACAATG CGGCGCCGCA TATGCGCGCC GCCAGCCTGT TCCAGCAGCA GCTCGGCTGC GTCACGCCCC AGGCCTTCGG CCTCGCCGCC GGGCTGCCGC ACCGGCGCAT CGTCTCGCTC GACACCGACG GGGGGCTGCT GTTCAACCTC GGCATCCTCG CCACCCTGGG CAACGAGCGG CCGAAGAACC TGTTCGTCGT CGTCTGGGAC AACCAGTGCT ACCAGTCGAT CGGCGGGCCG CCGACCCACA CCGCCAAGGG CCGCGTCGAT CTCGCGGCGA TCGCCCGCGG CGCCGGCGTC GATCACGCCT ACACGGTGCA CGACCTCGAC GGCTTCGAGC GGCACTGCGC CGAGGGGCTC GCGGCCGAGG CGCCCTACCT CGTCGTCGCG AAGGTGGCCG GCACCGTCCA GCCCGGCATC CGGCGCAAGC ACAGCGACGG GCGCGAGGAC AAGTACATCT TCGTGCGCCA CGTGGAGGCG AGCGAGGGCG TCACCATCAT GGGTCCGAGC GAGCACAACT GA
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Protein sequence | MSVEPEASGP PMTRYACMQR LAARLRDELV ILSLGGSVDE WYNAAPHMRA ASLFQQQLGC VTPQAFGLAA GLPHRRIVSL DTDGGLLFNL GILATLGNER PKNLFVVVWD NQCYQSIGGP PTHTAKGRVD LAAIARGAGV DHAYTVHDLD GFERHCAEGL AAEAPYLVVA KVAGTVQPGI RRKHSDGRED KYIFVRHVEA SEGVTIMGPS EHN
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