Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1828 |
Symbol | |
ID | 7113556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1882377 |
End bp | 1884470 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643524592 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_002420619 |
Protein GI | 218529803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.418777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCA TCGAGGAGGG CCTGCCGACA CCGCTTGGCG CGCATTTCGA CGGCCGCGGC GTCAACTTCG CCCTCTTCTC GCAGAACGCG ACCCGGGTCG ATCTCTGCCT GTTCGATCCC GGCGCCCGTC ACGAATCGCG TACGATCCGC CTGCCCTGCC GGACCGACGA CGTCTTCCAC GGCTATCTCC ACGGCCTTCT GCCGGGGCAG CAATACGCCT ACCGTGTGTT CGGCCCCTGG GACCCGGCGG CCGGCCACCG CTTCAACCCG GCCAAACTCG TCCTCGACCC CTATGCCCGC GAGATCGCCG GCCGCATCCG CTGGCACGAC GCGCTCTACA GCCATCGCCA CGGCGGCGCC CGCGAGGACC AGATCGACCG ACGCGACAGC GCTCCGTTCG TGCCCCGCGG CGTGGTCACC CGCCCCGACA CCCCCGACGC GATCGCCCTG CCCGCGCCGC GCCCGCTCCA CGAGACGGTG ATCTACGAGG CGCACGTCAA GGCGCTGACC CGGACGCATC CAGCCCTCTC GGAGGCCGAG CGCGGGACCT ATCTCGGCCT TGCTCACCCG GCGATCATCG AGCACTTGTT GAAGCTCGGC GTCACCGCCC TCGAACTCCT GCCGATCCAG GCCTTCGCCG ACGACCGCTT CCTCGTGGAC AAGGGCCTCG TCAATTTCTG GGGCTACCAG CCCTACAACT ACTTCGCGCC GGAGCTGCGC TATCTCGGCG AGGGCGGGGC GAGCGGGCTG CGCTTCGCCA TCCGCGAACT GGCCTCGGCC GGCATCGAGA CCCTGATCGA CGTGGTCTAC AACCACACGG CCGAGGGCGA TCATCGCGGG CCGACGTTCG CCTTCCGCGG CATCGACAAT GCGAGCTACT ACAAGCTCGA CCCCGACAAC CTTCGCCGCA ACATCGACTG CACCGGCTGC GGCAACACCC TGAACGTCGC CCATCCGCGG GTGATGCGGA TGGTGCTCGA CAGCCTGCGC CACTGGGTGA CCGCCTATGG CGTGGCGGGT TTTCGCTTCG ATCTCGCGAC GAGCCTCGGC CGCGCGCCGA GCGACTTCTC CCCCCAGGCC GCGTTCTTCC AGGCGGTGCA GCAGGACCCG GTTCTCTCGC GGGTCAAGCT CATCGCCGAG CCCTGGGACA TCGGCGGGGG CGGCTACCAG CTCGGCGGCT ATCCCTATGG CTGGAGCGAG TGGAATGACC AGTTCCGCGA CAACCTCCGC GGCTTCTGGC GGGGGGATTC CGGCACGCTG GCCAAGCTGA CGCAGGGGCT CTCCGGCTCG CGCGAAATCT TCCTGCCTTC GGGCCGTTCG CCGCTCGCCA GCATCAACTT CGTCGCCTCG CATGACGGCT ACACCCTCGC CGACGTGGTC GCCTACGAGG AGAAGCACAA CGAGGCCAAC GGCGAGGAGA ACCGCGACGG CCACGGCCAC AACCTCTCGG CCAATTACGG CGTCGAAGGA CCGACCGACG ATTTCCGCAT CCTGGCCCTA CGCGCCCGGC AGAAGCGCAA CATGCTGGCC TGCGTGTTCT TCGCGCAGGG CGTGCCGATG CTGCTGATGG GCGACGAGCG ATCCCGCACG CAATCCGGCA ACAACAACGC CTATTGCCAG GACGGCGCAT TGAGCTGGAT GGATTGGGAG AACGACCCCG ATCCGACGCT CACCGAGTTC GTGGCGAACC TCGCCGCGCT CCGCCGGGTC TGCTGTTCCC TGCGGCGGCG GCACTTCCTC GTTGGCAGCC GCGTCGGCGA GACGGCCCTG AAGGACGTGC ACTGGCTCTC CCCCGATGGG ACCGAGATGG ATGCGGCCGC CTGGGGCGAC GGCGAGCGCC GCGCCTTCGG CATGCAGATG AGCAACGATA TCGAGGACTC GGAGCGCGTC CTCATTCTCA TGAACGCGGC GCCTGAGCCC TGCCCCTTCG CGCTTCCACC CGATCTCGGC GGCCCCTGGC GGCCCGTCTT CGACACCACC CTCGACACCG GCAAGGTCCT CGACGGCGCG CGGCCGCCGG TCCCGGTCGG CGGCACCGTC GATCTGCCCG AGCGGGCGGT GCTTGTGCTG AAGTCGCCGC CCCTCCTCGA TTGA
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Protein sequence | MIVIEEGLPT PLGAHFDGRG VNFALFSQNA TRVDLCLFDP GARHESRTIR LPCRTDDVFH GYLHGLLPGQ QYAYRVFGPW DPAAGHRFNP AKLVLDPYAR EIAGRIRWHD ALYSHRHGGA REDQIDRRDS APFVPRGVVT RPDTPDAIAL PAPRPLHETV IYEAHVKALT RTHPALSEAE RGTYLGLAHP AIIEHLLKLG VTALELLPIQ AFADDRFLVD KGLVNFWGYQ PYNYFAPELR YLGEGGASGL RFAIRELASA GIETLIDVVY NHTAEGDHRG PTFAFRGIDN ASYYKLDPDN LRRNIDCTGC GNTLNVAHPR VMRMVLDSLR HWVTAYGVAG FRFDLATSLG RAPSDFSPQA AFFQAVQQDP VLSRVKLIAE PWDIGGGGYQ LGGYPYGWSE WNDQFRDNLR GFWRGDSGTL AKLTQGLSGS REIFLPSGRS PLASINFVAS HDGYTLADVV AYEEKHNEAN GEENRDGHGH NLSANYGVEG PTDDFRILAL RARQKRNMLA CVFFAQGVPM LLMGDERSRT QSGNNNAYCQ DGALSWMDWE NDPDPTLTEF VANLAALRRV CCSLRRRHFL VGSRVGETAL KDVHWLSPDG TEMDAAAWGD GERRAFGMQM SNDIEDSERV LILMNAAPEP CPFALPPDLG GPWRPVFDTT LDTGKVLDGA RPPVPVGGTV DLPERAVLVL KSPPLLD
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