Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1658 |
Symbol | |
ID | 7116803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 1704532 |
End bp | 1706379 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643524422 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_002420449 |
Protein GI | 218529633 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0826255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.784993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAGTT CATTGCGAAT TCTCTGCGTG CATGGCCTTG GCGATCAACG TCAAAGCAAC TGGGACGCAG ATTGGTCGAG TGCGATCAAG CGAGCCGTTG GAACGAGTGC TGGCGTTGAA TTGGATTTCC GATTTCTGAC CTACGATCCC ATATTCGAAC GCACCGATAT CAGTTTTGCG GAGACGCTCG GCGCCTTCTG GAAGCTGGCG CGCAGCGGCC TCGGCGGCTT GTTTCGTCAG CCACGTGGCC CGGTCAGCAA TATTTCGGAC CGACTCCGCT GGACCGCCGG CTACGTCGTT GCCTGGGTGG AGGATGAACA GTTCCAGCAA GAGACCCGCG CGCTCGTGCT CGATACGCTG CGCGACTACA AGCCCGACAT CGTCCTTGCT CATAGCCTCG GCTCTCTCGT CACTTACAAT GCCTTCTCAC ACGCGGATGC GGGGGAAAGC GAGGCGGCCA AGGCGCTCGC GAGCACACAC TACGTGACGT TCGGATCGCA GATCGGAAAT CCTTTTGTCC TGGGAAATCT GACATACGGC CGCGTTCAAC GTCTTGCCGT CAGGCATTGG CACCATCTCT ACAACGAACA CGACGATGTT TTCACCGCAC CCCTAAAAGT TCAAGGTGTC GACAATTTCA ATCAGCTTCT GACGCCGTTC GATCTCCCCG GTTTCGGAGA TCATGATGCG GCCGGCTACC TCACGCATGC CGTGACCCAA ACCTCCTTCT GGACGCCGAT GGTCGACCTC GCGGCCCGTC AATCCAGGGC AGTGGGTCGC AAAGCGGTGG CGGGCGTCAA TCGTTGGAAT CGGTCGCTTC CGACCGCGGC CCCATCCACG CGGCGCAAAG CGCTCCTGAT CGGAATCGAC GATTATCCCG ATCCCGCCAA TCGGCTGTCG GGTTGCGTCA ACGATGTTTT CGCGATGAGC GCGACCTTGC AGGATTGCGG GTTCGAGCCG GAGCAGATTC GCGTATGCCT GAACGAGCGC GCCACCGCGG ACGGCATCAT CTCTCGGCTC GAATGGCTGG TCGATGGTGC GCAATCCGGT GACCAGTTGG TGTTCTTCTA CTCCGGGCAC GGCGCGCGCG TGCCGGAATA CGGCCAACAG GAGGAGCCGG ACCGTCTCAC TGAGACGCTC GTGCCGTATG ACTTCGACTG GACACCAGAG CACGGCGTGT CCGATGAGCA GATCAACCGC TTCTACGCGC AACTTCCCTA TGAGACCCAC CTCCTGATGA TTTTCGACTG CTGCCATTCC GGCAGCATGC ATCGCGATGG CGCCGGTCGC GCACGTGGGA TCACGCCCCC GGACGACATT CGGCACCGCC AGCTCCGATG GAACCGCGAA GCGGAGATGT GGGTCGAGCG TGACTTCACC CCGCTCAACA AGGCCTTTTC GAGCCAAGCG GCGAAACGGC AGGCTTTCTT CGGCTCTAAC CTCGCCACGG TCCGCCTGGG ACGCGCCGCC TTGCTCCGCG TCAACGACCA GAAGAGCTAC GACCGGGCCA AGAAAGCACG CGGAGCGCCG ATTGGGCCGT TCCTCCCCGT CATCATCGAA GCCTGTGGAG AGGAGCAATA CTCCTACGAG TATCGTCATG GCGCGACCAG CTACGGCGCC TTCACCTTCT GCCTCACATC CATCCTGCGC AAAGAGAAGA ACATTACCTT CCAGAAGCTT GTACAGCTCG CGACTGAGCG TCTGGAACGG CTCGGCTATA ACCAGAAGCC GCAAATCCTG GGGCCAGCCA TCGACCTCGA TGCGAAGGTG CCGTTCGAGA CAGGGCGAGT CGGTCAGCCG CCCGCCCGCA ACCTGCCCGG CTCAGCGACG CCGCGAACCT CCGGGTGA
|
Protein sequence | MPSSLRILCV HGLGDQRQSN WDADWSSAIK RAVGTSAGVE LDFRFLTYDP IFERTDISFA ETLGAFWKLA RSGLGGLFRQ PRGPVSNISD RLRWTAGYVV AWVEDEQFQQ ETRALVLDTL RDYKPDIVLA HSLGSLVTYN AFSHADAGES EAAKALASTH YVTFGSQIGN PFVLGNLTYG RVQRLAVRHW HHLYNEHDDV FTAPLKVQGV DNFNQLLTPF DLPGFGDHDA AGYLTHAVTQ TSFWTPMVDL AARQSRAVGR KAVAGVNRWN RSLPTAAPST RRKALLIGID DYPDPANRLS GCVNDVFAMS ATLQDCGFEP EQIRVCLNER ATADGIISRL EWLVDGAQSG DQLVFFYSGH GARVPEYGQQ EEPDRLTETL VPYDFDWTPE HGVSDEQINR FYAQLPYETH LLMIFDCCHS GSMHRDGAGR ARGITPPDDI RHRQLRWNRE AEMWVERDFT PLNKAFSSQA AKRQAFFGSN LATVRLGRAA LLRVNDQKSY DRAKKARGAP IGPFLPVIIE ACGEEQYSYE YRHGATSYGA FTFCLTSILR KEKNITFQKL VQLATERLER LGYNQKPQIL GPAIDLDAKV PFETGRVGQP PARNLPGSAT PRTSG
|
| |