| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1852 |
|---|
| Symbol | |
|---|
| ID | 3997513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 1949603 |
|---|
| End bp | 1950616 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637959596 |
|---|
| Product | putative mRNA 3-end processing factor |
|---|
| Protein accession | YP_566485 |
|---|
| Protein GI | 91773793 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.681251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACAGAT TTGCAGACAT GGGAGTTCTG GCATTCCGCC AGACAAATTC ACGAGGAACG
TTCAAACCCC ATCTTGCCGT GAAATTTCGG GCAGATGATG AGAACCTTTG CACATTTTCC
ATCGATTCCA CGCGTCTTCC TAATAAACAG CCGCAACCGG ATGCTTATCT TGTCACTCAT
GCTCATTCTG ACCATAACGG AAAGTCTGCA ATGCTCTCTG ACCTCTCAGT TTCTACAGAA
AAGACAGCTA AAGCACTTGA GATACGTCAT GACCGTGATT TTAAGGGGCG TACTGTAGCA
TGTGGGGATT CCATCGATAT CAATGGTGTT ACCGTAAAGA CCTATCAGAC GGGACATACT
GCGGGAGCGG TTGGCTTCTA TTGGGTGAAC GATGTGGGTA CCCGTATCCT TGTCACCGGG
GATGTTAAGG ATGCTTCTGC ACTGCCAAAA TGTGACGTAC TGATAACTGA AGCGAACTAT
GGGGATCATT CTGACCCGTC CTGTCATTTT GAGGATGATC TTGAAGGGTT TAGAAATGTC
ATGGAATGTG GTTCTCAGGT TGCTTTCGGT GCTTATGCTT TCGGGAAGGC GCAACGTGCA
GTGGAGCTTT TGCGTGGCAT TGGCTATCAT GGGACTATCG CAATGGAAGA AAAATCATTG
CTTCTGACAC GCAGCCTTGT AGATAATGCC GGGGATATAG TGGCCATCGG GGAATGCGAT
GAAGACGAGG TGTGCATCGT ACCGCCTTGG GATTTTAAGA AGTTGCCTCA TTCGATGAAA
AAATATGTGC TGACAGGAAG GCTGGACTAT AGTTATCCTG CTTTGCAGGT AAGTGACCAT
CTTGACGCTA ATGGGCTTGC TAAGATGGTG GAAGATATAG ATCCTGAGTT GACAATTGTG
TATCATCCTT CAGGAGAAAG GCCGGAAAAG TTCGCTTCAT ATTTGAATAG TGTAGGTAGA
GAGGCTGTAT CCCTTGATCA GGTCAGCAAT GTACTGAGTA ATGAGTTTCT TTGA
|
|---|
| Protein sequence | MNRFADMGVL AFRQTNSRGT FKPHLAVKFR ADDENLCTFS IDSTRLPNKQ PQPDAYLVTH
AHSDHNGKSA MLSDLSVSTE KTAKALEIRH DRDFKGRTVA CGDSIDINGV TVKTYQTGHT
AGAVGFYWVN DVGTRILVTG DVKDASALPK CDVLITEANY GDHSDPSCHF EDDLEGFRNV
MECGSQVAFG AYAFGKAQRA VELLRGIGYH GTIAMEEKSL LLTRSLVDNA GDIVAIGECD
EDEVCIVPPW DFKKLPHSMK KYVLTGRLDY SYPALQVSDH LDANGLAKMV EDIDPELTIV
YHPSGERPEK FASYLNSVGR EAVSLDQVSN VLSNEFL
|
|---|
| |