Gene Mbur_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1498 
Symbol 
ID3998396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1574204 
End bp1575061 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID637959255 
Productcondensin subunit ScpA 
Protein accessionYP_566155 
Protein GI91773463 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00138218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGATA TTCCAGAGGT GCCTGAAGGG ATCGATGCAA GTGTGGATAA AGCAGGCGCT 
GGCATCGAGG AGATCGTCAA AATATCCAGT AGTTCCATTG ATCCCGAGTT TCTTGAGACC
CTTCGCTCCC TCGGTGTCGA TGAATCGCAG ATCGAGATCT CCGATGATGT TCTCTGTGAG
CCTGTGGAGA TATTCGTCAC CCTTGCGAAG AACGGGGATA TTAATCCCTG GGATATTGAT
ATTGTCGAAG TTACGGATAA GTTTCTCGCA TATATAGAAG ATCTTAAGAT AATGGACCTG
AGGATATCGG GAAGGACCCT TCTATATGCA TCTATTCTTC TCAGGATGAA ATCAACAGGT
CTTGCTCAGG AAGAGGTGGA ATTGGATGAT GATCTTCTGG ATGATGAAAT GGATTTTTAT
GACATCGAAG AATATCCAGT GCCAAAGCTT CCTATACGCC GTACTGCGAC TCGGCCGGTC
ACTCTTCAAG AGCTTATAAC TGAGCTTAAG AAGGCAGAAA AGGTCGAGAC CAGAAGGAAA
GACCGCAGAA TACGCCGCCG TCTTGAAGTA TTTGACAGGG TCACTACAGA TGATGTGCTC
GGGATAGCGC ATGAGGAGGA TATACGCGGC AGGGTGGACA CCCTTTATAC TTCTCTGGAA
GAGTTGTTTA GAACCAGGGA TGAAGTTATG TTCTCGGACC TTGTAGACTG GTCCGGAAGC
CGTTCGGAAA GATTGATGAC GTATATCTCA CTGCTGTTCC TTGCTTCTGA GAAAAAGGTA
TTGTTGGCAC AGGAAGAACT TTTCGGGGAA TTATTTGTGC ACCCCCCATC TGTCATTGAA
TTATTTGAAG AGGAATAA
 
Protein sequence
MNDIPEVPEG IDASVDKAGA GIEEIVKISS SSIDPEFLET LRSLGVDESQ IEISDDVLCE 
PVEIFVTLAK NGDINPWDID IVEVTDKFLA YIEDLKIMDL RISGRTLLYA SILLRMKSTG
LAQEEVELDD DLLDDEMDFY DIEEYPVPKL PIRRTATRPV TLQELITELK KAEKVETRRK
DRRIRRRLEV FDRVTTDDVL GIAHEEDIRG RVDTLYTSLE ELFRTRDEVM FSDLVDWSGS
RSERLMTYIS LLFLASEKKV LLAQEELFGE LFVHPPSVIE LFEEE