Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0669 |
Symbol | |
ID | 3997999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 687318 |
End bp | 689030 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637958470 |
Product | cell surfacr protein |
Protein accession | YP_565388 |
Protein GI | 91772696 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00389799 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGACAA CTAAACAGAG CAAAATAAAT CTTGTTGCAA TTACCCTGGT TTTTATAGTA ATAACTATTG GGACCGTTAA TGCAGCTACT GTCATAGTAG ATGACAGTGG TGGAGCAGCC TATACTACGA TACAGCAAGC TATAGATAAT GCAACTGCTG GCGATACAAT CATTGTTAAC TTTGGGACGT ACACTGAAAA AATCCATGTC AACAAATCAT TAACAATAAT TTCGAAATCA GGAAATCCGG GAAATTCCAT TGTTCAAGCC ATAGATTCAA GTGATTCTGT ATTTCATATA ACTGCAGACG AAGTAAAGAT CAACGGTTTT CATGTGAAGG ACAGCGTTGA ACGTTACTGG GAAGATTCCG TACCTGGAAT CTACCTCGAT GGAGCTCATA ATAGTGTCAT TAGCAACAAT CAATTCTCCA ACATTTATTA CGGAATCGTT CTTGAATCAT CCGGCAATAA CACCTTGAGT AACAATATTG CAACATACAA CATTGGCGGC ATCCATCTTA TTGATTCAAA CAACAATATA CTGGATAATA ACACTTTGTT GAACAACTCT GAGAATGGGA TCTTTTTTGA ACATTCTATA TACAATCATC TGATCAATAA TACTGCCTTT AACAGTGTTG ATGGGATTCG CCTTACCAAA TCCCAAAACA ACTTTCTGAA TAATAACATC GTATCAAACA ATAGTTGTGG GATCTATCTT GAGACATCCG ATGAGAACAC CTTGGACGAT AACATTGCAT TGAATAATTT TTGTGGGATC CGCCTTATAG GATCAAGCTA CTGCATATTG AAAAATAACA CCGCATCAAA TAACAACGAT GGTATCTATC TGCAGGATTC CTGCAGCAAC AATACCCTGA TCAATAACAA TGCTTCGAAT AATCATGCTG GTATCTCCTT GAGAGTGTTT AACAAAAATA ACACTTTGAG TTATAACAAG GCAAATTCAA ATAACGAACA CGGGATACTT CTCTTTTCTT CTAACAATAA CATATTGAGA GGTAACACTG CATCAAACAA CGACATAGGC ATCTTCCTTA AGTACTCTAA TAGAAATCTT CTGGAAAATA ACACCGGATC GAACAAGAAA TACGGAATAT ATCACAGTGA TTCCAAGTAC AATACTTTGA GCAATAACAA AATCAATGGC AACGTTTTCT TGAAGCTACT GGCGTTTAGT TCCTTGCTAA TAGTAATCAT GTTCAGTACC TCATATATAC TCTGGAATAA AATTGACAAG AAGAGATCAA TTCTCTCAAC ATCGATGATA CTGTTACTTC CACTCCTGCC TACATTGATA GGAGTGATGC ATGAGCTACA TTTGCTGGAA ACAATAATCT CTATTCACCC GTGGAATTAC ATGTTGATAA GGATCTTGGA ATTCGGTCTG CCTGCAGCAG TCATAATTTT TTATGGATAC ACAACGGGGG ACAAGATTTT TTCGACACTT TCAGGAGTAT TTCTAATTCC CTTGTTCTCC ATATATGCAG AAGTCCTTAT GGAAATGCTG AATCCTTATT TTATTCTAAA CCTTGGACAT TGGTTGCGCT GGAATGCAAT CGTTGCTATA TTCCCATTTA TGGTACTTTA CGGATTAACA GGTTATTTTG GAGCAAGAAG AACAAAAGTA TCCCTTATAA TTTCAATTTG TATTGCCATA TTCATTCTTG TTATAATCAG CGGAATCGAT TGA
|
Protein sequence | MMTTKQSKIN LVAITLVFIV ITIGTVNAAT VIVDDSGGAA YTTIQQAIDN ATAGDTIIVN FGTYTEKIHV NKSLTIISKS GNPGNSIVQA IDSSDSVFHI TADEVKINGF HVKDSVERYW EDSVPGIYLD GAHNSVISNN QFSNIYYGIV LESSGNNTLS NNIATYNIGG IHLIDSNNNI LDNNTLLNNS ENGIFFEHSI YNHLINNTAF NSVDGIRLTK SQNNFLNNNI VSNNSCGIYL ETSDENTLDD NIALNNFCGI RLIGSSYCIL KNNTASNNND GIYLQDSCSN NTLINNNASN NHAGISLRVF NKNNTLSYNK ANSNNEHGIL LFSSNNNILR GNTASNNDIG IFLKYSNRNL LENNTGSNKK YGIYHSDSKY NTLSNNKING NVFLKLLAFS SLLIVIMFST SYILWNKIDK KRSILSTSMI LLLPLLPTLI GVMHELHLLE TIISIHPWNY MLIRILEFGL PAAVIIFYGY TTGDKIFSTL SGVFLIPLFS IYAEVLMEML NPYFILNLGH WLRWNAIVAI FPFMVLYGLT GYFGARRTKV SLIISICIAI FILVIISGID
|
| |