Gene Mboo_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2407 
Symbol 
ID5411628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2476075 
End bp2476623 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID640869664 
Productresponse regulator receiver protein 
Protein accessionYP_001405564 
Protein GI154151946 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA GTCCTGCAAA CCCTGCGGAA AAGAGAATCC TGATCGTGGA AGATGAAGGG 
CTGGTGGCCA TGACCCTGGA AGAGACCCTC CGGCGGATCG GGTACTTGGT CGTAGGCATC
GCGCTGAGTG GTGAGGAAGC AATCACCCTG ACGGGGGAAC AGCACCCGGA CGTGATCCTG
ATGGATATCC GCCTGCAGGG CGGGATGGAT GGGATCGAGG CGGCCCAGAA GATCAAGGGC
CAGTTCGGGA CGCCGATCAT CTTTCTTACC GCGTACAGTG ACGATGAGAC CATCCGGCGC
GTTGTTATGA CTGAGTCAAG CGGGTACCTG GTCAAGCCCA TCAATACCCG GGAACTTTTT
GCCGGGATCG AGAGCGCCCT CTATAAGAAG CGCCGGTTCG ATCGTTTCAT GGAGCAGCAG
GCAACCGCAA GCAGGCCGGT CTGCCCGTGC GGCACACCGA TGATCCAGGC ATTTTCCCCG
GAGAAGGGAG AGATGATAGC AGTTGGCTGG GTCTGTCCAA AGTGTCATCA CTTTGTGCAG
GGGAACTGA
 
Protein sequence
MLKSPANPAE KRILIVEDEG LVAMTLEETL RRIGYLVVGI ALSGEEAITL TGEQHPDVIL 
MDIRLQGGMD GIEAAQKIKG QFGTPIIFLT AYSDDETIRR VVMTESSGYL VKPINTRELF
AGIESALYKK RRFDRFMEQQ ATASRPVCPC GTPMIQAFSP EKGEMIAVGW VCPKCHHFVQ
GN