Gene Mboo_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2287 
Symbol 
ID5411944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2358516 
End bp2359613 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID640869540 
Producthypothetical protein 
Protein accessionYP_001405444 
Protein GI154151826 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGGCC GGCACATTGC GGTCATCGCA AAGAAGGAAT TCCGGGGGCT CGCGTCAGAG 
AAAACAATCC TCTTAGCCAT CCTGCTCCAG GTTTTTATCG CGCTCTTCTC GTCATTCCTC
ATGGTTGGGC TCACCGCAAT GTACGACCCG GTCTCGCTCT CGCGCTACTC CCATTTCCGG
TATGATATCG CGTATGCCGG AAACGAGAGT CCGCTGCTTG GGTATCTGGA GGGGAGCAAC
GATCTCCGGG TGCACCGGAT GGACCTCTCG ACCGCAGTCG AGCTCCTCAA GGAGCGCCGG
CTCTCCGCGG TAGTGTACGT GCCGGATACA GCACCCGGTT CCGACGACCC GGTCAAGATC
ACGCTATACA CACTGACCGA CGATCTGCAG GGTGCAGTTG TCGATGTGCG GCTCAAGTCG
GTCCTGTTGC AGTACGAGGG CGACCTGCGC ACGATCCGGG CCGGCCGGCT CGATGTGACG
CCGATCCCGC TCCAGGTCCC GGCGTCCGCT GGCAGCGGGG ACTTCTACGG GTTTGTGTAC
GGTCTCCTGG TCCCGCTGCT GGTCTTTTTG CCGGGCATCC TCTCTGCCGC GCTCGTGATC
GATCTTATCA CTGAGGAATA CCAGCACGGG ACACTAGAGA CACTCATCTC AACGCCGGTC
ACGTTTGCCG AGATGGTCTG GGGTAAGGTG CTGATCTGCG CCATCCTTGT CCCGGTTCAG
GCCGGGGCAT GGATCCTTCT CCTCTCGCTC AACCGGATCG CGATTGCGGA TCCCCTGCTG
ATCCTGCTCC ACGTTACGTT CGCGTCCCTG CTCCTGATCC TGATCGCTGC GTGCTGCGCT
CTTTATTACC GTGAGCGTAC CGCTGCGCAG TTCGTCTTCT CAACGGCACT CGTGGTGATC
CTGCTACTCG TGCTCGCCCT GCCCTACAAC CCGCTCAATC TCGTGGCCCG GATAGCCGTC
GGGACCGCAG GAGCAGAGCA GTGGATTGTC CTTGGTGCGG TCATGGCAGC AGTCCTTGCT
CTTGGATATG TGATGCAGAA ATATGCAGGC CGGATCGGTG GGCGCAGCGC AGGAGAGGAG
GGACAGGGGC CCGGATAA
 
Protein sequence
MKGRHIAVIA KKEFRGLASE KTILLAILLQ VFIALFSSFL MVGLTAMYDP VSLSRYSHFR 
YDIAYAGNES PLLGYLEGSN DLRVHRMDLS TAVELLKERR LSAVVYVPDT APGSDDPVKI
TLYTLTDDLQ GAVVDVRLKS VLLQYEGDLR TIRAGRLDVT PIPLQVPASA GSGDFYGFVY
GLLVPLLVFL PGILSAALVI DLITEEYQHG TLETLISTPV TFAEMVWGKV LICAILVPVQ
AGAWILLLSL NRIAIADPLL ILLHVTFASL LLILIAACCA LYYRERTAAQ FVFSTALVVI
LLLVLALPYN PLNLVARIAV GTAGAEQWIV LGAVMAAVLA LGYVMQKYAG RIGGRSAGEE
GQGPG