Gene Mboo_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2179 
Symbol 
ID5412212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2254692 
End bp2255663 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID640869429 
Producthypothetical protein 
Protein accessionYP_001405336 
Protein GI154151718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.257809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA ATAAGGTAAA AATTCTGATT CTCTGCGCTG TTATCCTGGC GATGCTTGTC 
CCGGCCGCCC TGGCCGATAA CACGATTGGC GGTGCCGAAG GCTGGTACCA GGTAAACTGC
AATGTTGATG GTGCGACAGT GTATTTCGAC AACCAGTACA TGGGCACCAT AACCGGCGGT
TCGCTGACCG TCCCGGTCTA TTCGACCGGC ACACCTTACC AGACCTTCTC GGTGAGCGCA
AGCGGGTATA CGACCTATAC CGGCCAGATC ACCGCGTATC CTTCGAAAGG GGGAACGGTA
AATCTTTATG CGACCTTAAC TGCGGTTGTC CCGACCACGA CTGCCTCCGT CATTGGCGGG
GCCCAGGGCT GGTACCAGGT GTACTGCAAT GTCAACGGTG CTTCCGTGTA TTTTAACGGC
CAGTACATGG GCGTCATAAG CGGTGGCTCG CTCACGGTCC CGGTCTACGC GACCGGTACA
CCCTATACCA CCTATTCAGT GAGCGAAAGC GGGTATACCA CTTATACCGG GCAGATCACA
GGTTATCCCT CAAAAGGGGA GACCGTTGAC CTCTATGCGA CCTTAAACGC CGCTGTCCCG
ACAACGACGG CGGCACCTAT TGGCGGCGGA CAGGGCTGGT ACAAGGTTAA CTGCAATGTG
GACGGTGCGC AGGTTACGTT TGACAACCAG ATCATGGGTA CTATCAGCCA GGGCTCGCTC
ACGGTCCCGG TGTACGTCAC CGGCACACCT TACCAGACCT ACTCGGTATC TGCCCCGGGT
TATGTCACGT ACACCTCGAC CCTTACGCAG TTCCCTACCG TCGGCCAGAC CGTGGCCCTC
TATGCCACCT TAAACCCCCA GGCCACTACG GTTCCGACCA CAACCTATGC ACCGCTGACG
CCCGGGCTTG CAGGTGCTGC GATCCTGATT GCGGGCCTTG GGTTTGTATT CTCCCGCAGA
AAGGACAATT AA
 
Protein sequence
MTTNKVKILI LCAVILAMLV PAALADNTIG GAEGWYQVNC NVDGATVYFD NQYMGTITGG 
SLTVPVYSTG TPYQTFSVSA SGYTTYTGQI TAYPSKGGTV NLYATLTAVV PTTTASVIGG
AQGWYQVYCN VNGASVYFNG QYMGVISGGS LTVPVYATGT PYTTYSVSES GYTTYTGQIT
GYPSKGETVD LYATLNAAVP TTTAAPIGGG QGWYKVNCNV DGAQVTFDNQ IMGTISQGSL
TVPVYVTGTP YQTYSVSAPG YVTYTSTLTQ FPTVGQTVAL YATLNPQATT VPTTTYAPLT
PGLAGAAILI AGLGFVFSRR KDN