Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2179 |
Symbol | |
ID | 5412212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2254692 |
End bp | 2255663 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869429 |
Product | hypothetical protein |
Protein accession | YP_001405336 |
Protein GI | 154151718 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.257809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAA ATAAGGTAAA AATTCTGATT CTCTGCGCTG TTATCCTGGC GATGCTTGTC CCGGCCGCCC TGGCCGATAA CACGATTGGC GGTGCCGAAG GCTGGTACCA GGTAAACTGC AATGTTGATG GTGCGACAGT GTATTTCGAC AACCAGTACA TGGGCACCAT AACCGGCGGT TCGCTGACCG TCCCGGTCTA TTCGACCGGC ACACCTTACC AGACCTTCTC GGTGAGCGCA AGCGGGTATA CGACCTATAC CGGCCAGATC ACCGCGTATC CTTCGAAAGG GGGAACGGTA AATCTTTATG CGACCTTAAC TGCGGTTGTC CCGACCACGA CTGCCTCCGT CATTGGCGGG GCCCAGGGCT GGTACCAGGT GTACTGCAAT GTCAACGGTG CTTCCGTGTA TTTTAACGGC CAGTACATGG GCGTCATAAG CGGTGGCTCG CTCACGGTCC CGGTCTACGC GACCGGTACA CCCTATACCA CCTATTCAGT GAGCGAAAGC GGGTATACCA CTTATACCGG GCAGATCACA GGTTATCCCT CAAAAGGGGA GACCGTTGAC CTCTATGCGA CCTTAAACGC CGCTGTCCCG ACAACGACGG CGGCACCTAT TGGCGGCGGA CAGGGCTGGT ACAAGGTTAA CTGCAATGTG GACGGTGCGC AGGTTACGTT TGACAACCAG ATCATGGGTA CTATCAGCCA GGGCTCGCTC ACGGTCCCGG TGTACGTCAC CGGCACACCT TACCAGACCT ACTCGGTATC TGCCCCGGGT TATGTCACGT ACACCTCGAC CCTTACGCAG TTCCCTACCG TCGGCCAGAC CGTGGCCCTC TATGCCACCT TAAACCCCCA GGCCACTACG GTTCCGACCA CAACCTATGC ACCGCTGACG CCCGGGCTTG CAGGTGCTGC GATCCTGATT GCGGGCCTTG GGTTTGTATT CTCCCGCAGA AAGGACAATT AA
|
Protein sequence | MTTNKVKILI LCAVILAMLV PAALADNTIG GAEGWYQVNC NVDGATVYFD NQYMGTITGG SLTVPVYSTG TPYQTFSVSA SGYTTYTGQI TAYPSKGGTV NLYATLTAVV PTTTASVIGG AQGWYQVYCN VNGASVYFNG QYMGVISGGS LTVPVYATGT PYTTYSVSES GYTTYTGQIT GYPSKGETVD LYATLNAAVP TTTAAPIGGG QGWYKVNCNV DGAQVTFDNQ IMGTISQGSL TVPVYVTGTP YQTYSVSAPG YVTYTSTLTQ FPTVGQTVAL YATLNPQATT VPTTTYAPLT PGLAGAAILI AGLGFVFSRR KDN
|
| |