Gene Mboo_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1400 
Symbol 
ID5410962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1431024 
End bp1431317 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content50% 
IMG OID640868633 
ProductDNA/RNA-binding protein albA 
Protein accessionYP_001404561 
Protein GI154150943 
COG category[K] Transcription 
COG ID[COG1581] Archaeal DNA-binding protein 
TIGRFAM ID[TIGR00285] DNA-binding protein Alba 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0373029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.247283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAA GCATGCAGCC GATGAAAGAA AATACCGTGT TTGTGGGAAA CAAACCCGTG 
ATGAACTATG TGCTTGCGGT CGTCACCCAG TTTAACAACG GGGCCGGTGA AGTCTCCATC
AAGGCCAGGG GCAAGGCAAT CTCACGGGCA GTCGATACCG CAGAGATTGC CCTGAACCGG
TTCCTCGATG GAATCAGCAA AAAGGAGATT ATTACCTCCA CTGAGGTGAT CGACACCGAT
ACCGGCAAGA CCAATGTCTC GAGCATCGAG ATTATCCTTT CTGCAAAAAA ATAA
 
Protein sequence
METSMQPMKE NTVFVGNKPV MNYVLAVVTQ FNNGAGEVSI KARGKAISRA VDTAEIALNR 
FLDGISKKEI ITSTEVIDTD TGKTNVSSIE IILSAKK