| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0925 |
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| Symbol | |
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| ID | 5409971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 907939 |
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| End bp | 908304 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868151 |
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| Product | blue (type1) copper domain-containing protein |
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| Protein accession | YP_001404086 |
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| Protein GI | 154150468 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000269051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGGA TCGGGATTGC CCTTTTCCTT GCAGCCCTGC TTATTTTTGT TGCGGGCTGC
ACCGGGTCAT CCCCGCCACC GGCCCCCCAG ATACGGGCAT ACACCCCACA GACAACGATC
CTTATAGGGA GTACCAGCGT TAATCCGCAG GTCCTTACTG TGGAAAAGGG CGTAACCGTT
ACATGGCTCA ATATCGATAT GGGGTTGCAC ACGGTTGCTT CCGATGAGGG GGATCCCGAC
TCTTTTGTGT CCTATCCGCT GTCAACGAAC GATGAGTTCC AGTGGACATT TACCCTGCCG
GGAACGTACG GCTACCACTG CACGGATAAT CCCAACATAA AAGGGACGAT CATCGTAAGT
TCCTGA
|
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| Protein sequence | MARIGIALFL AALLIFVAGC TGSSPPPAPQ IRAYTPQTTI LIGSTSVNPQ VLTVEKGVTV
TWLNIDMGLH TVASDEGDPD SFVSYPLSTN DEFQWTFTLP GTYGYHCTDN PNIKGTIIVS
S
|
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