| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0040 |
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| Symbol | |
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| ID | 5411340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 35710 |
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| End bp | 36798 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867254 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001403207 |
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| Protein GI | 154149589 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGG ATCGTGCCAC ACTCCTCTCC GGTGCAGTGG AAGGGGACCG GATTAGCGAA
AAGGACGCAC TGCGCCTCTT TTCAACACGC GACCGCGACG TCTGGAAGAT CGCGGCTGCC
GCGGATGAGA AACGGGAGCA GGTTGTCGGT GATGCAGTTA CCTATGTCAG GAACCAGAAT
ATCAACGTGA CCAACCTATG CGTCAACGCT TGCGGGTTCT GCGGTTTTGG AAAAAAGCCC
GGCGATGAGG GCATCTATTT CCATGATGAG GCGGTTATCC GGGAGAAGGC TGCGCTTGCA
AAATCGCGGA ATGTTACCGA GATCTGTACG GTAAGCGGCC TGCACCCGGC CTTTACCGCA
CAATCCTATA TCGATGTGTA CCGCTGGATC GGGGAGGCCG CCCCGGGGGT ACACCTGCAC
GCGAGTAACC CGATGGAGGT GGCATATGCG GCGCGGAAAA GCGGCATGAG CACAAAAGAG
GTGCTCGCGG CGATGAAGGA CGCCGGCCTT GCCTCCATGT GCGGGACAGC GTCCGAGATC
CTCGTTGATT CCGTCCGGGA GAAAATCTGC GCTCAGAAGA TCCCGACCGC GGAATGGGTA
CGTATTATCA GAGAGGCGCA CCAGCTCGCG ATTCCCACCA CTGCCACTAT TATGTACGGC
CATTGCGAGA CCGATGCAGA CCGGGTGCGC CACCTTGCCA TACTCCGGGA GATCCAGGAC
GAAACCAAAG GATTTACGGA ATTTGTCCCG CTCTCGTTTA TCCACATGAA CACACCCATC
TTCCGGAACG GGACCGCCCG GGCAGGGGCC ACCGGCCGGG AAGATCTCCT GATGGTTGCA
GTTGCCCGGC TCTTCCTTGA CAATTTCGCA AACATCCAGG TCTCGTGGGT CAAGGAAGGG
ATCAAGATGG CGCAGCTTGG CCTCCTTGCC GGGGCAAACG ATCTCGGGGG CACGATGTTT
GAAGAGAGCA TCTCCAAGGG TGCCGGCGCT ACAAATACCG ATTACCTGGA CCCGGCCGAG
ATGCAGCGGG TAGCAGAAGA CCTGGGCCGG ACGCTTTGCC GGCGCACAAC CCTCTATAAA
CCGGTCTGA
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| Protein sequence | MDRDRATLLS GAVEGDRISE KDALRLFSTR DRDVWKIAAA ADEKREQVVG DAVTYVRNQN
INVTNLCVNA CGFCGFGKKP GDEGIYFHDE AVIREKAALA KSRNVTEICT VSGLHPAFTA
QSYIDVYRWI GEAAPGVHLH ASNPMEVAYA ARKSGMSTKE VLAAMKDAGL ASMCGTASEI
LVDSVREKIC AQKIPTAEWV RIIREAHQLA IPTTATIMYG HCETDADRVR HLAILREIQD
ETKGFTEFVP LSFIHMNTPI FRNGTARAGA TGREDLLMVA VARLFLDNFA NIQVSWVKEG
IKMAQLGLLA GANDLGGTMF EESISKGAGA TNTDYLDPAE MQRVAEDLGR TLCRRTTLYK
PV
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