Gene Mbar_A3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3597 
Symbol 
ID3626739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4617663 
End bp4617887 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content40% 
IMG OID637702428 
Productsmall nuclear riboprotein-like protein 
Protein accessionYP_307045 
Protein GI73671030 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0124482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCCCAA ATAAAAAAGT TCAGAAAATT GTTGGATCAA GAATCCAGGT AGAAATGAAA 
GGCGATCTTA ATCTGCTTGA AGGCACTCTT AAGAGCGTGG ACGACTATAT GAACCTTCAT
CTCGTGGACA CCATGGAGAT CGTAAAAGGA GAAAAAGTTC GTTCCCTTGG CTCAGTAGTA
CTTCGTGGCA ATAACATTAT ACTGATCACT CCTATCGAAG AATAA
 
Protein sequence
MFPNKKVQKI VGSRIQVEMK GDLNLLEGTL KSVDDYMNLH LVDTMEIVKG EKVRSLGSVV 
LRGNNIILIT PIEE