Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3593 |
Symbol | |
ID | 3626735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4611365 |
End bp | 4612501 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637702424 |
Product | transmembrane protein |
Protein accession | YP_307041 |
Protein GI | 73671026 |
COG category | [S] Function unknown |
COG ID | [COG2237] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.596596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0196638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCT TAGTTATATG CATAGACAGA GACAACGATC TGGGCGAAAA AGCAAAACTC GAAACCCCAA TAGTAGGACG GGAGGCAAAT GTTCAGGCTG CCGTCGCACT TGGGATCGCA GACCCGGAGG ATTCTGATAC CAACACTATC TTCGGTGGAA TCAGGATTCT TGATGAATTA CGGGCAAAAG GAACTGATGC TGAGATAGTT TCTTTTGCAG GAGATAAAAA TGTTGGAGTG ATCTCAGACC AGAAAATTTC CGAGCAGCTT GAAACATTTC TCAATATGTA TGACGTGCAG CGGGCGGTAT TCGTCTCGGA TGGGGCAGAG GACGAAACGC TTGTGCCTAT TGTCCAATCC CGTATGAGAA TTGACTCCGT AAAAAGAATC GTAATAATGC AGAGCCAGAA TCTGGAAAGT ACTTACTATA TCCTGAAACA TGTTTTTAGC GACCCAAAAA TCTCCCAGAC TTTCTTTGTA CCTTTAGGGC TTGCTTTTCT CATTTATGCA ATATTTTTGC TTGCAGATTA TCCCGATGGT GCAGTTATAG GAATTCTTGC AGCTGTAGGG CTTTACATGT TGTACAGGGG TTTTGGACTG GACGATCTTG TCGCTCTTGA AAAAGAAAAG CTCTGGGACG CTTTTCTTGA ACAGAGAATG GTTTTTATCA GCTATACGGC TTCCCTGCTT ACACTCCTTG TAGCAACTGT GTACGGAACT ATGGAAGTAT GGAAGCTTTA CTCGGCAGAT GGGGTATGGT ATCAAGGGAT CCTTACGCTT GTCTCAGTAT TCATCAATGC TTCAGTCTGG TGGTATGCAG GAGCCATGCT GCTTGCCGAC CTTGGTAAAA TCTTCGATTT AAAGATGGAA AATAAGCCCA TTTATAAAAA TATCGCGATT TCTTTATTTG TGATCGCAAC AGGGCTGCTC TTCTGGGGCG CAAGTACATA CATTTTAGCG ACGGCTTCCC TTTCGGAAGG CATTACTAAT GATGCATCCA TTGCTCTACA GTACTTTGTG TATTCGGTCG CAGTTGCGAT TCTTATTTCT CTTGCAGGCA TAAAATACAG CGTATCAAAC CAGGCCTCCG AAAACGAAGA GAAAGGAAGA GATAAAAGAA GGAAAAAACT CGCCTGA
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Protein sequence | MQTLVICIDR DNDLGEKAKL ETPIVGREAN VQAAVALGIA DPEDSDTNTI FGGIRILDEL RAKGTDAEIV SFAGDKNVGV ISDQKISEQL ETFLNMYDVQ RAVFVSDGAE DETLVPIVQS RMRIDSVKRI VIMQSQNLES TYYILKHVFS DPKISQTFFV PLGLAFLIYA IFLLADYPDG AVIGILAAVG LYMLYRGFGL DDLVALEKEK LWDAFLEQRM VFISYTASLL TLLVATVYGT MEVWKLYSAD GVWYQGILTL VSVFINASVW WYAGAMLLAD LGKIFDLKME NKPIYKNIAI SLFVIATGLL FWGASTYILA TASLSEGITN DASIALQYFV YSVAVAILIS LAGIKYSVSN QASENEEKGR DKRRKKLA
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