Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3438 |
Symbol | |
ID | 3624874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4406438 |
End bp | 4407103 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702266 |
Product | 1-pyrroline-5-carboxylate synthetase |
Protein accession | YP_306891 |
Protein GI | 73670876 |
COG category | [R] General function prediction only |
COG ID | [COG2054] Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0400881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTGG TAATTAAAAT AGGAGGAAGC CTTATCAAAG AGGCTCCCGA GCTTGTAGAT AGGCTTGTAA AGGAATTTGG CTCAGGAAGC CCGATTCCAG AGGAAGCGCA TGCATCTGAA GGACTTCCTT GTTCCGTTCT AATAGTACCC GGAGGAGGCG TTTTTGCTGA TGCTGTGAGG AAAACTGATG AGAACTTTTC CCTGAGTGAG GATGCTGCGC ACTGGATGGC TATAATGGGT ATGGAACAGT ATGCCTGCTA TCTTAAGGAT AAAAGCCGCG CACTGGGCAT AGATTCAATA GCCAATCTGC CTCAGGGTGT GTCTGTTCTT TTTCCATACA GACTCTTAAG AACGGAGGAT CCTCTGCCTC ATAGCTGGGA TGTGACCTCG GATACTATCG CGGCCTGGGT TGCAAAGCAG ATTGGGGCAA CTTTAATAAA GGCCACAGAT GTGGACGGTA TATTCAGAAA TGGGAAATTA GTCAGGGAAA TTTCTGCTGT CAGCTATAGA GGAAGTCGCG AAAGCTGTAT TGATTTTGCC CTACCGGGAT TTCTCCTGAA AAACCGAATG GAGTGCCTGA TCATAAACGG AAAATTTTCA GATAGAGTAA TTCATGCTGT ATATGGGAAG TCTGTGCTCG GTACTGTGGT AAAGGGGAAT ATTTAA
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Protein sequence | MRVVIKIGGS LIKEAPELVD RLVKEFGSGS PIPEEAHASE GLPCSVLIVP GGGVFADAVR KTDENFSLSE DAAHWMAIMG MEQYACYLKD KSRALGIDSI ANLPQGVSVL FPYRLLRTED PLPHSWDVTS DTIAAWVAKQ IGATLIKATD VDGIFRNGKL VREISAVSYR GSRESCIDFA LPGFLLKNRM ECLIINGKFS DRVIHAVYGK SVLGTVVKGN I
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