Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3419 |
Symbol | |
ID | 3624706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4382591 |
End bp | 4383196 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637702247 |
Product | transcription regulation protein |
Protein accession | YP_306872 |
Protein GI | 73670857 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.909274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.462694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGATCTT TTACATCTGG AGAAAGAGAG ATCATAAGAA ATAAAATCAT AGATCGGGGT AAAGAATGCT TTGCCATATA CGGAATAAAG AAAACGAGCA TTGAAGATCT TACCAGAGAT CTTGGAATTT CAAAAAGTTC TTTCTACTCT TTCTTTAATA GCAAAGAGGA TCTTTTTCTA CATATATATA AGAAAGAGCG AGAGGCCTTA AAGGACAACT TATTAGAAAA TTCCTTCCTG AAATACAGGA AGGAACCTGA TAAAGCGATA AGAGCTTATC TTCATTGTTT ACTGGATATT GCTAATAAAC ACCCAGTCTG GAGAAAAGTT TACATTGAAA AAGAGCACCT TGAGTTGACA ATTTCCCAGT CTTCAGAGGA AGAAATCAAA AATATTCGTA GAGAAAACGT GGAAATGATT CTACCCTTTT TTGAAGAATG GGCAGCTGCC GGTCTTCTAA TAGACAAAAA TACCAGGATT CTTGCTGAAA CCACATATGC GGTTATTTCC CTCGTTCATT TCAGGAATGA AATTGAAGAT GAGGATTTTC AGGATATAAT GGATATTCTT ATTGATCTTC TGGCAGAAAA TATAATAAAA AAGTAA
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Protein sequence | MRSFTSGERE IIRNKIIDRG KECFAIYGIK KTSIEDLTRD LGISKSSFYS FFNSKEDLFL HIYKKEREAL KDNLLENSFL KYRKEPDKAI RAYLHCLLDI ANKHPVWRKV YIEKEHLELT ISQSSEEEIK NIRRENVEMI LPFFEEWAAA GLLIDKNTRI LAETTYAVIS LVHFRNEIED EDFQDIMDIL IDLLAENIIK K
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