Gene Mbar_A3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3419 
Symbol 
ID3624706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4382591 
End bp4383196 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content34% 
IMG OID637702247 
Producttranscription regulation protein 
Protein accessionYP_306872 
Protein GI73670857 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.909274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.462694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATCTT TTACATCTGG AGAAAGAGAG ATCATAAGAA ATAAAATCAT AGATCGGGGT 
AAAGAATGCT TTGCCATATA CGGAATAAAG AAAACGAGCA TTGAAGATCT TACCAGAGAT
CTTGGAATTT CAAAAAGTTC TTTCTACTCT TTCTTTAATA GCAAAGAGGA TCTTTTTCTA
CATATATATA AGAAAGAGCG AGAGGCCTTA AAGGACAACT TATTAGAAAA TTCCTTCCTG
AAATACAGGA AGGAACCTGA TAAAGCGATA AGAGCTTATC TTCATTGTTT ACTGGATATT
GCTAATAAAC ACCCAGTCTG GAGAAAAGTT TACATTGAAA AAGAGCACCT TGAGTTGACA
ATTTCCCAGT CTTCAGAGGA AGAAATCAAA AATATTCGTA GAGAAAACGT GGAAATGATT
CTACCCTTTT TTGAAGAATG GGCAGCTGCC GGTCTTCTAA TAGACAAAAA TACCAGGATT
CTTGCTGAAA CCACATATGC GGTTATTTCC CTCGTTCATT TCAGGAATGA AATTGAAGAT
GAGGATTTTC AGGATATAAT GGATATTCTT ATTGATCTTC TGGCAGAAAA TATAATAAAA
AAGTAA
 
Protein sequence
MRSFTSGERE IIRNKIIDRG KECFAIYGIK KTSIEDLTRD LGISKSSFYS FFNSKEDLFL 
HIYKKEREAL KDNLLENSFL KYRKEPDKAI RAYLHCLLDI ANKHPVWRKV YIEKEHLELT
ISQSSEEEIK NIRRENVEMI LPFFEEWAAA GLLIDKNTRI LAETTYAVIS LVHFRNEIED
EDFQDIMDIL IDLLAENIIK K