Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3114 |
Symbol | |
ID | 3626564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4003390 |
End bp | 4005186 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637701952 |
Product | sterol-regulatory element-binding protein intramembrane protease |
Protein accession | YP_306581 |
Protein GI | 73670566 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.896096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.810156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATGGCA CAAACATTGC ACTGAGTATT TTTTTACTGT ACTGGTTCGC AGTTTCCGTT CTTGACAGGA AAGGTATTCT GGAGAAGTAC AACATAAGCA CCTTCGGGCC GCTTCCTATC CTTATGATCA GGACAACTAA GGGCCTCAAA CTGCTGGATG TACTGGCCCG TCCGAAGGCT TACTGGAGGA TATTTGCAAA CCTTGGAATC TTACTGATGT TTGCAGGCAT GATTGCAATG TTCCTGGTCA TAGCTATCTC AGATCTCGGG CTGTATACTT CTCTCCTTAG CGGAAATATG CCTGAACCGG GAAAGTATAA TTCTCCGAGA AATATATTTC TCATTCCGGG ATTAAATGAG TTCATTCCTC TTACCTGGGG AGCTATTGCC CTTATAGTCA CTCTTGTCGT GCATGAGTTT TCACATGCGA TTCTTTGCAG AGTTGAAGGC ATCCGGGTCA AATCTATGGG TATCCTGTAT GCTCTGGTCC CCATAGGAGG TTTTGCGGAG CCTGACGATG AACAGCTTTT CGGGACGAAA GAGAAAACAG AAAGAGAACT TCCGCTGACA GCCACAATCG AGGAAATCGA AGAATGGGAA AAAGAAGAAA AAATAAGGCA AGAAACTGAG AAAACAAAGC CTGATGAACC GAAATCCGAG CCTGTAATCG GTGCAACAAG AACTCAGAGA TCCCGGATTC TTGCAGCAGG TGTTATGGCC AATTTTAGCG TGGCTTTTAT CGCTCTCCTG CTCTTCTTCG GGCCTGTACT CGGGGCAATT GCGCCCTTAA GTGATGCCAT GATCCTGAGT GTAAACGAAA GTTCTCCGGC TGACCATGCA GGGCTCGAAA ACGGCATGAT AATAACGCAG ATTAATGATG CCAATATCAC GACAGCCGAA GATCTGCGAA CATACCTTGA AAAAACCCAG CCTGGAGACA CGGTTCGTAT CTCTGCCACA AAAAACGGTA CAGTCTCTAC ACATGATTTG CAGGTTGCCT CAGTCCCTGA GAACTATATC GGCGGAGGAG TGCCTGTAGG AGGAATTGTT TCGGGAAGTC CCGCAGAAGC TGCAGGGATC AAAACCGGAA TGACAATGAT CAGGATTAAC GATACGAAGA TGCAAAATGT TTCAAATTTC GTAAGTTTTA TGGAAACCAC CAGGGCAAAC CAGACTGTGG AAGTAGAACT TCTTCCTCCT GAAAACTACA CAGGCAACCT CACTGAAAAA GGCACTGTCG TCTTCGATGT GAAACTGTCA TCCAATTCGG AGCATGATTA CGGTTTCCTT GGAGTTGTTT ACGGGAATAA TGCAGTTATG GAACTCCCGA TGCTCGGAGT CTCCGTGTTG ATGCCTCAGG CAAAACTGTA TCTTGAAGCC CTGAAGCAAA TTCCATCCTT GCTAACTATG CCTGCAGGCT GGATCATTCT TTTTGGACTT CCAATTTATG GATTTGCAGG GGAAGGATTC CGAGGTTTTT CAGGTACCTT CATGCAGTTT TATCAGCCCG TGGGCTGGGC AGAACCTCTA GGAGTAGGGA TTTTCTGGAT TGCAAATACC TTGCTCTGGG TTGGCTGGCT GAACTTCTAT GTCGGACTGT TCAACTGTTT GCCTGCCGTG CCCCTGGACG GAGGGCACGT GTTTAAGGAT TCTACCTATT CCTTTGTATA CCGGTTTACA AGGAATGACT CAATCTCAGA AAAGGTTTCA AACTCTATCA CAGCAAGCTT TTCAATGTTA ATCCTGTTCT CGTTTATCTT TATGATATTC GGGCCTTATA TAGGGCAATG GATGTGA
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Protein sequence | MNGTNIALSI FLLYWFAVSV LDRKGILEKY NISTFGPLPI LMIRTTKGLK LLDVLARPKA YWRIFANLGI LLMFAGMIAM FLVIAISDLG LYTSLLSGNM PEPGKYNSPR NIFLIPGLNE FIPLTWGAIA LIVTLVVHEF SHAILCRVEG IRVKSMGILY ALVPIGGFAE PDDEQLFGTK EKTERELPLT ATIEEIEEWE KEEKIRQETE KTKPDEPKSE PVIGATRTQR SRILAAGVMA NFSVAFIALL LFFGPVLGAI APLSDAMILS VNESSPADHA GLENGMIITQ INDANITTAE DLRTYLEKTQ PGDTVRISAT KNGTVSTHDL QVASVPENYI GGGVPVGGIV SGSPAEAAGI KTGMTMIRIN DTKMQNVSNF VSFMETTRAN QTVEVELLPP ENYTGNLTEK GTVVFDVKLS SNSEHDYGFL GVVYGNNAVM ELPMLGVSVL MPQAKLYLEA LKQIPSLLTM PAGWIILFGL PIYGFAGEGF RGFSGTFMQF YQPVGWAEPL GVGIFWIANT LLWVGWLNFY VGLFNCLPAV PLDGGHVFKD STYSFVYRFT RNDSISEKVS NSITASFSML ILFSFIFMIF GPYIGQWM
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