Gene Mbar_A3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3048 
Symbol 
ID3624845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3927246 
End bp3927500 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content27% 
IMG OID637701889 
Producttransposase 
Protein accessionYP_306519 
Protein GI73670504 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00273884 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.555878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAATA GGAAAAACGA GACAAGGAAT CATAGCAAAT TTTTGTTAAT GTATCATATT 
ATCTTTGTTT GCAAATACCG AAAAGTCGCA CTTGAACCGA TTAGCGAAGA AATTAAACAA
ATTATGTATG ACATTTCAAA AGAGTCAAAT TTTGAAATTA TTGAAATGGA AACAGACAAA
GACCATATTC ATTTATTGAT TAAGAGTGAA CCAAAAGTTA GTGTTTTATC TATTGTCAGA
AAATTAAAAC AATAA
 
Protein sequence
MVNRKNETRN HSKFLLMYHI IFVCKYRKVA LEPISEEIKQ IMYDISKESN FEIIEMETDK 
DHIHLLIKSE PKVSVLSIVR KLKQ