Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3048 |
Symbol | |
ID | 3624845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3927246 |
End bp | 3927500 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637701889 |
Product | transposase |
Protein accession | YP_306519 |
Protein GI | 73670504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00273884 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.555878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAAATA GGAAAAACGA GACAAGGAAT CATAGCAAAT TTTTGTTAAT GTATCATATT ATCTTTGTTT GCAAATACCG AAAAGTCGCA CTTGAACCGA TTAGCGAAGA AATTAAACAA ATTATGTATG ACATTTCAAA AGAGTCAAAT TTTGAAATTA TTGAAATGGA AACAGACAAA GACCATATTC ATTTATTGAT TAAGAGTGAA CCAAAAGTTA GTGTTTTATC TATTGTCAGA AAATTAAAAC AATAA
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Protein sequence | MVNRKNETRN HSKFLLMYHI IFVCKYRKVA LEPISEEIKQ IMYDISKESN FEIIEMETDK DHIHLLIKSE PKVSVLSIVR KLKQ
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