| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2807 |
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| Symbol | |
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| ID | 3625192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3590825 |
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| End bp | 3592690 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637701657 |
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| Product | DNA topoisomerase VI subunit B |
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| Protein accession | YP_306287 |
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| Protein GI | 73670272 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1389] DNA topoisomerase VI, subunit B |
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| TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000949011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00390833 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTCA CCATTGCAGA AGAACTTGCC AAAAATCAAA AGTCAATAAG CGTTGCAGAA
TTTTTTGAAA AAAACAGGCA GATCCTGGGT TTTGACTCGG CTCCCCGAAG CCTCATAACA
ACTGTAAAAG AAGCTGTTGA CAATGCCCTG GACGCCTGTG AGGAAGCAGG AATTCTGCCC
GATATTCTTG TCCAGATTGA AAGAACCGGA CAGGACTATG TAACTGTTAT TATAGAAGAT
AACGGACCAG GAATTATAAA AGAGCAAATC CCCAAAGTTT TTGCAAAGCT TCTCTATGGT
TCCAGGTTTC ATGCTCTTAA GCAAAGCAGG GGACAGCAGG GAATAGGAAT TTCCGCAGCC
GTCCTCTATG CCCAGATGAC TGCGGGCAAG CAGACGAAAA TCCTCTCCAA AACCGGCTCC
GGTAACCCTG CACATTATTA CGAGCTTATG ATCAATACCA GCACGAATGA ACCAGACATC
CTGAAAGACG AGATAAGGGA CTGGTTCCGC CCACATGGGA CCCAGATCGA GCTGGAAATG
AAGGCTGCCT ACGTAAAAGG AAGAAGGCAG TCCATTTCCG AGTACCTCAA AGCTACTGCA
ATTGTGAATC CACATGCAAG AATTACCCTT ATAGAACCTG ACGGCAATGA GGAGGTTTTT
GAAAGAGCCA CGGATAAGAT GCCCAAGCCA GCCGAAGAAA TCCTGCCTCA TCCTGAAGGT
ATAGAACTTG GCACTCTAAT GAAGATGCTC CATTACACTG AGCGCCAGAA ACTTGCCCCA
TTTCTTCGCT ACTCTTTTTG CAAAATTGGG TTGTTAACTG CCGAGGAAAT CTGCAAAGCT
TCAGGGCTTG ACCCTGAGAT CGACCCTCAT GCTCTTGGCC GCCATGAAGC GAGAAAGCTA
ATTGAGGCTT TTGAGAAGGT AAAGATCATG TCTCCTCCCA CGGACTGTCT TTCCCCAATA
GGAGAAGAGC TGATTTACAG GGGGCTTGAA AAAGAAACAA ATGTGGATTT CATTGCCACA
AGCACCCGAA AACCCGCAGT ATATTCAGGA AATCCTTTTG TGGTGGAAGT GGGACTCGCT
TACGGAGGAA AACTTCCAAA AGAAGAAAAG ATCAGTATAA TGCGTTTTGC TAACCGTGTG
CCTTTGCTTT ACCAGCAGGG AGGCTGTGTA ACCACACATG CCGTAGAAGA CATTAAATGG
AAACAATATG GCTTAAACCA GCCCGGAGGA GGAGTTCCTG TAGGCCCGGC TATCCTCTTG
ATCCATGTTG CTTCTATTAA CGTGCCTTTC ACTTCAGAAT CAAAAGATGC TATTGCTGAC
ATTCCTGTAA TCAAGGACGA GATCGACCTC GCGATCAAGG ATGTTGCAAG AAAGCTCAAG
CACTATCTGA GCAAGCAGAG CAACCTCAAG AAGCGCCGGG AAAAAGAGAT TATCATTACA
AAAGTACTCC CTAAAATGGC TGTAAAGGTT GCTAATATCC TGGAAAAAGA TGTCCCGGAC
ATTAATCCTG TCGTTGCAAA AATTATGGGA AACCTGCTTG TACACAGAAA AGTGAAGAGA
AACGAGGATG GGACTGCAGA CGTTGTAATA AAAGTCAAGA ATTTCGGGAC CTCTGCATAT
GCTTTCAAAG TTCATGAGAT GCTGCCCTGT ACGATCCTCG GAGCAAAGCC CGAACCAAAG
GTTGTGACTT TGGGCAATGA TTACGATTAT GTATGGGATA TCTCAGCAGC AGCTGGGTCT
TCAAAGGTGC TCAGCTACAG GATAGAATCT ACAACCGATA AAGAACTTGG AACATTTCCT
GACCTTGTTG TGGAAGGACT TGAAGAAGAG CTTGTAACCG GGGCAAAAGC CTTTAAGGGG
GTATAA
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| Protein sequence | MEFTIAEELA KNQKSISVAE FFEKNRQILG FDSAPRSLIT TVKEAVDNAL DACEEAGILP
DILVQIERTG QDYVTVIIED NGPGIIKEQI PKVFAKLLYG SRFHALKQSR GQQGIGISAA
VLYAQMTAGK QTKILSKTGS GNPAHYYELM INTSTNEPDI LKDEIRDWFR PHGTQIELEM
KAAYVKGRRQ SISEYLKATA IVNPHARITL IEPDGNEEVF ERATDKMPKP AEEILPHPEG
IELGTLMKML HYTERQKLAP FLRYSFCKIG LLTAEEICKA SGLDPEIDPH ALGRHEARKL
IEAFEKVKIM SPPTDCLSPI GEELIYRGLE KETNVDFIAT STRKPAVYSG NPFVVEVGLA
YGGKLPKEEK ISIMRFANRV PLLYQQGGCV TTHAVEDIKW KQYGLNQPGG GVPVGPAILL
IHVASINVPF TSESKDAIAD IPVIKDEIDL AIKDVARKLK HYLSKQSNLK KRREKEIIIT
KVLPKMAVKV ANILEKDVPD INPVVAKIMG NLLVHRKVKR NEDGTADVVI KVKNFGTSAY
AFKVHEMLPC TILGAKPEPK VVTLGNDYDY VWDISAAAGS SKVLSYRIES TTDKELGTFP
DLVVEGLEEE LVTGAKAFKG V
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