Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2779 |
Symbol | |
ID | 3625107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3533580 |
End bp | 3534521 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701630 |
Product | hypothetical protein |
Protein accession | YP_306260 |
Protein GI | 73670245 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0353015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTTA TCAGGAGACT GAATATTTTT ATTTTGCTCA TTTTGATCCT TTTTATCGCA TATATCCGAT ACCTGACTAA CTTCTACATC TTCGAGGATC GATCTCTCCT AGATGCCCTT CTGATCTCTT TACTTGTGAT TTTTCTGGCC TATATAATAA ATTTCATTAC CGGAAATCTT ATTCTTAGAA AAGTATCGAC TGCCAAAGAT AGATATACTC TGAGAAAAAC TGCATCTATC CTTATCACAG TACTTGCTTT TGCCGCACTT TTTGCGATCT GGTTCAAGAG AACCAGCACC CTGCTTATTG CCTATGGGAT TCTCAGTGCA GGAGTCGCAA TTGCACTTCA AGACCTTTTG CGCAACATAG TCGGAGGTGT TCTCCTAATT TTATACCACC CTTTTAAAGC AGGAGATCGG ATTCAAGTTG AAGACAACGT AGGTGATGTG CTTGACATAG GGAGCATAAG TACCACAATA ATGGAAATCA GGGAATGGGT GGATGCAGAT CAGTATACTG GCAGGATTCT CCATATCCCT AACAGCTTTG CCCTCAATAA AACGATAAAA AACTACACTA GGGATTATTC CTTTATCTGG GACGAAGTTC GTTTTCTACT TATTTACGGG AGCAACTGGA AAAAAGCTGA GGGAATTACA CTCAGTGTTG CAGGTTCAAT ATTAGGAGAG TTCGAAAACC TGGCACAGAA AGAACTCCGG CGAATGGGGC AAAAATATTT TATTACTACC TATGATGTAC AGACAAAGCT CTATATGAAA ATGGAGGAAA ATTGGATAGA AATGCAGTTA AGATATGTAG TCGAGCCCAG GAAAAGGAGA GAAATTAGCC ACCTTTTGGT CTCAAATATT CTTGAAGCCC TTGAAAAAGA AAAAGATATA ATGGTTGGAA CTGCTACAAG TATCGACCTT ATGGGTAGAT AA
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Protein sequence | MRVIRRLNIF ILLILILFIA YIRYLTNFYI FEDRSLLDAL LISLLVIFLA YIINFITGNL ILRKVSTAKD RYTLRKTASI LITVLAFAAL FAIWFKRTST LLIAYGILSA GVAIALQDLL RNIVGGVLLI LYHPFKAGDR IQVEDNVGDV LDIGSISTTI MEIREWVDAD QYTGRILHIP NSFALNKTIK NYTRDYSFIW DEVRFLLIYG SNWKKAEGIT LSVAGSILGE FENLAQKELR RMGQKYFITT YDVQTKLYMK MEENWIEMQL RYVVEPRKRR EISHLLVSNI LEALEKEKDI MVGTATSIDL MGR
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