Gene Mbar_A2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2779 
Symbol 
ID3625107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3533580 
End bp3534521 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content39% 
IMG OID637701630 
Producthypothetical protein 
Protein accessionYP_306260 
Protein GI73670245 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0353015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTTA TCAGGAGACT GAATATTTTT ATTTTGCTCA TTTTGATCCT TTTTATCGCA 
TATATCCGAT ACCTGACTAA CTTCTACATC TTCGAGGATC GATCTCTCCT AGATGCCCTT
CTGATCTCTT TACTTGTGAT TTTTCTGGCC TATATAATAA ATTTCATTAC CGGAAATCTT
ATTCTTAGAA AAGTATCGAC TGCCAAAGAT AGATATACTC TGAGAAAAAC TGCATCTATC
CTTATCACAG TACTTGCTTT TGCCGCACTT TTTGCGATCT GGTTCAAGAG AACCAGCACC
CTGCTTATTG CCTATGGGAT TCTCAGTGCA GGAGTCGCAA TTGCACTTCA AGACCTTTTG
CGCAACATAG TCGGAGGTGT TCTCCTAATT TTATACCACC CTTTTAAAGC AGGAGATCGG
ATTCAAGTTG AAGACAACGT AGGTGATGTG CTTGACATAG GGAGCATAAG TACCACAATA
ATGGAAATCA GGGAATGGGT GGATGCAGAT CAGTATACTG GCAGGATTCT CCATATCCCT
AACAGCTTTG CCCTCAATAA AACGATAAAA AACTACACTA GGGATTATTC CTTTATCTGG
GACGAAGTTC GTTTTCTACT TATTTACGGG AGCAACTGGA AAAAAGCTGA GGGAATTACA
CTCAGTGTTG CAGGTTCAAT ATTAGGAGAG TTCGAAAACC TGGCACAGAA AGAACTCCGG
CGAATGGGGC AAAAATATTT TATTACTACC TATGATGTAC AGACAAAGCT CTATATGAAA
ATGGAGGAAA ATTGGATAGA AATGCAGTTA AGATATGTAG TCGAGCCCAG GAAAAGGAGA
GAAATTAGCC ACCTTTTGGT CTCAAATATT CTTGAAGCCC TTGAAAAAGA AAAAGATATA
ATGGTTGGAA CTGCTACAAG TATCGACCTT ATGGGTAGAT AA
 
Protein sequence
MRVIRRLNIF ILLILILFIA YIRYLTNFYI FEDRSLLDAL LISLLVIFLA YIINFITGNL 
ILRKVSTAKD RYTLRKTASI LITVLAFAAL FAIWFKRTST LLIAYGILSA GVAIALQDLL
RNIVGGVLLI LYHPFKAGDR IQVEDNVGDV LDIGSISTTI MEIREWVDAD QYTGRILHIP
NSFALNKTIK NYTRDYSFIW DEVRFLLIYG SNWKKAEGIT LSVAGSILGE FENLAQKELR
RMGQKYFITT YDVQTKLYMK MEENWIEMQL RYVVEPRKRR EISHLLVSNI LEALEKEKDI
MVGTATSIDL MGR