Gene Mbar_A1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1486 
Symbol 
ID3627543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1835846 
End bp1836523 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID637700372 
Producthypothetical protein 
Protein accessionYP_305021 
Protein GI73669006 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.29092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATAT CGGGGAAAAC ACACCTTAGG GGAGCTAATC TTATAGGAGC TAAACTTCAA 
GGAGCGGACT TGCAAGAGGC TGACCTTGTA AAAACTAACC TTGAAGGAGC TGATCTTCGG
GGAGCTAATC TTAAAAAGGC TGACCTTCGA GGAGCCAACC TTTCAGATAC TCACCTTCTT
GAAGGTAAAG GAGCTAATCT TCAAGAGGCT AACCTTCAAG AAGCTAATCT ACAGGGAGCT
AGTCTTGTAA AAACTAATCT TGAACAGGCT AACCTTGAAG GAGCTAATCT TCAACTGGCT
AACCTTCATC TGGCTAATCT TAAAGGAGCT AACCTTAAAA AGGCTAACTT TCAAGTGGCT
AATCTTGAGG GAGCTCACCT GCAGGGAACT AATCTTGAAG AGGCTGACCT GTATGGAGCT
GGCCTTCAAG AAGCAAATCT TCAAGAGGCT AACCTTAGAG GCGCTAATCT CTATGGGGCA
GACCTTCACA AAGCCTATCT TCTGAAAGCT GATCTTGAGG GAGCTAAGCT TGAAGGGACT
AACCTTACAG GAGTTCATGA TTTATCCATT GAACAAGCTT CTAAAGTGAA AACACTTTAT
AACGCAAAGT TAGACGAAGA GATCCTGATT CCATTAAAGG AGAAGTATCC TGCCCTGTTT
GAAAAAAACG GGAAATGA
 
Protein sequence
MGISGKTHLR GANLIGAKLQ GADLQEADLV KTNLEGADLR GANLKKADLR GANLSDTHLL 
EGKGANLQEA NLQEANLQGA SLVKTNLEQA NLEGANLQLA NLHLANLKGA NLKKANFQVA
NLEGAHLQGT NLEEADLYGA GLQEANLQEA NLRGANLYGA DLHKAYLLKA DLEGAKLEGT
NLTGVHDLSI EQASKVKTLY NAKLDEEILI PLKEKYPALF EKNGK