| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0963 |
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| Symbol | |
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| ID | 3626459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1172729 |
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| End bp | 1174183 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637699856 |
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| Product | replication factor A |
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| Protein accession | YP_304515 |
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| Protein GI | 73668500 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TTGAATCAAT TTATAAAAAA CTTAGCCATG TTATCAGTAA AGAAGACTTC
CTGCAACGTG TACAGGAAAA GGTCGAAAGC ATGGGAGGGC TTTGCGATGA ACCTATGGCT
GCCATGCTGG TTGCCAACGA ACTTGGATTT TCGGATGTAG GTCGGGACAG TGTAAAGATT
GAAAACATTA CAGCTGAGAG CGGACAAATT AACTTTGTTG CAAAGGTTGT GTCAGTTTTC
GATACCAAAG AATTTACCCG AAACGACGGG ACGATAGGTA GAGTCGGAAA TATAATTGTT
GGAGATGAAA CCGGAAAGAT TAGGCTAACA CTCTGGGACA ACATGGCAGA TCTCATAAAG
GCTGGAAAAA TCATAGCAGG ACAAACCCTC CAGATCAGCG GCTATGCGAA ACAGGGATAT
TCGGGAGTGG AAGTCAATGT AGGAAATAAT GGAGTCCTGG CCGAGAGTGA AGAAGAAATC
GATGTGGCTG CCAACAACCA GAAAATAAAG GATATAAAAG ATGGCATGGG AGACCTGAAT
TTGACAGGAA AAGTCCTGGA AATTTCAGAA GTAAGGACCT TCCAGCGAAA AGACGGTACC
AGCGGAAAGG TCGGAAACCT GCTTCTTGGA GACAGTACAG GCACAGTCAG GGTGACCCTA
TGGGACGACA GGACCGAGTT CCTAAACCAG ATAGAATACG GAGACACTGT GGAGCTGGTT
AATGCTTATG CGCGAGAAAA TGCTTTTACT CAGAAAGTTG AATTGCAGGT GGGAAACCGA
AGTATAATAA AGAAAAGTGA AAAAAAAGTC GAGTACGAAG AGGAATTTGC CCCAATTGAA
GATATAAGGG CTGATATGAA CAATATTAAC GTTTCCGGTA GAGTGCTCGA TATAGGGGAA
ATCCGGACCT TTGAGAAAAA AGATGGGTCT CCCGGAAGAG TAGGAAATCT TCTTCTTGGC
GATTCCACTG GAAAAATCAG GCTAACTCTC TGGGATGAAA AAACCAACTT TCTGGATGAA
GTTGATTTTG ACGAGACCAT AGAAGTACTT CATGCTTATT CTCGGGAAAA TGCCTTCAAC
CAGCAGGTGG AACTCAATCT AGGAAACCGG GGGATAATCC AGAAGAGTGA AAAGGAGATT
GAGTATAGAG AAAAATTTAC GGATATTGCT GATATTATCC CTGGGGAAAG CTATTCGGTC
CAGGGGAAGG TTTCCGAAAT AGGGGAACTC CGAGAGTTTG AAAGAGAAGA TGGAACCGAG
AACGTGGTTG CAAATCTCCA ATTAAAAGAC GAAACCGGCA GCATAAGGTT AACTCTCTGG
GGAGAACAGG CTTATGTGAT CGAAGATCTT GATATTGACT CCGAAATCCA GATCATTAAT
GCGTATGCGA AGTATGGCCT GAATGAAGAA ATCGAGCTGA GTATTGGGAA CCGAAGCAGA
GTAATTATGC TTTAA
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| Protein sequence | MTDIESIYKK LSHVISKEDF LQRVQEKVES MGGLCDEPMA AMLVANELGF SDVGRDSVKI
ENITAESGQI NFVAKVVSVF DTKEFTRNDG TIGRVGNIIV GDETGKIRLT LWDNMADLIK
AGKIIAGQTL QISGYAKQGY SGVEVNVGNN GVLAESEEEI DVAANNQKIK DIKDGMGDLN
LTGKVLEISE VRTFQRKDGT SGKVGNLLLG DSTGTVRVTL WDDRTEFLNQ IEYGDTVELV
NAYARENAFT QKVELQVGNR SIIKKSEKKV EYEEEFAPIE DIRADMNNIN VSGRVLDIGE
IRTFEKKDGS PGRVGNLLLG DSTGKIRLTL WDEKTNFLDE VDFDETIEVL HAYSRENAFN
QQVELNLGNR GIIQKSEKEI EYREKFTDIA DIIPGESYSV QGKVSEIGEL REFEREDGTE
NVVANLQLKD ETGSIRLTLW GEQAYVIEDL DIDSEIQIIN AYAKYGLNEE IELSIGNRSR
VIML
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