Gene Mbar_A0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0862 
Symbol 
ID3627274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1042381 
End bp1043382 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID637699749 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_304416 
Protein GI73668401 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA AGCACTTAAC ATACGCAGAT TCAGGCGTAG ATATTACAAA GGAAGAAAAA 
ACTGTTAAAA CCCTTATCGA AAAATTGAGC TATGTCCGAA AAGGTATGGG GGCTCCCCTT
ACAGGAATAG GGCATTATGC AGGGCTTCTG GACTTCGGAG AATATGCCCT TGCTCTGACT
ACTGATGGGG TAGGCTCAAA AGTTCTTATT GCAAACGAAA TGCAACGGTG GAATACGGTA
GGCATAGACT GTATCGCAAT GAATGTAAAT GACCTTCTAG CCATAGGAGC CGAGCCTGTA
GCCTTTGTAG ATTATCTTGC CCTGGAAAAG CATGAAGAAG GTTTCGCCGC CCAGATAGGA
GAAGGGCTGG TAAAAGGCGC GGAAATATCC AGAATGTCCA TCGTTGGCGG AGAAACCGCA
ACCCTGCCAG AAATAATTAA AGGTTTTGAC CTTGCAGGTA CTTGCCTTGG AATTGTCCGG
AAAGATGAGA TTGTCGAGGG AGAGAAAGTA AGAGTAGGTG ATGTGATTGT AGGTGTCCCA
AGCACAGGCG TTCACAGCAA CGGCTATACT CTTGTAAGGA AAATCATTGA GGAATCCAGG
TACTCTTATC ACGACCCCTG TCCCTATGAC AATTCAAAAA TGATCGGAGA CGAGCTCCTA
ACTCCAACAA GAATTTATAT TGAGATTCTT GATGTGCTGA AAGCATGTGA AGTTCATGGA
CTTGCCCATA TAACAGGCAG CGGACTTTTG AAACTGAGAA GAGTGACAAA ACTCGGTTTT
GATTTTTACG ATCCTCTTGA ACCCCAGGAA ATTTTCAAAT TCTTGCAGAA GGAAGGCGGA
GTTGAGGATC TTGAAATGTA CAGAACCTTC AATATGGGTA TGGGTTTTCT TGTTATCTTA
CCGGAAAAAG ATGCTGCAAA AGCTGCAAAG ATTACCGGTG GAAAAATCGT AGGAAAAATT
GTAGAAAGCG GGATCAGAGT CAAAGACCTG GTAATAGAGT GA
 
Protein sequence
MSEKHLTYAD SGVDITKEEK TVKTLIEKLS YVRKGMGAPL TGIGHYAGLL DFGEYALALT 
TDGVGSKVLI ANEMQRWNTV GIDCIAMNVN DLLAIGAEPV AFVDYLALEK HEEGFAAQIG
EGLVKGAEIS RMSIVGGETA TLPEIIKGFD LAGTCLGIVR KDEIVEGEKV RVGDVIVGVP
STGVHSNGYT LVRKIIEESR YSYHDPCPYD NSKMIGDELL TPTRIYIEIL DVLKACEVHG
LAHITGSGLL KLRRVTKLGF DFYDPLEPQE IFKFLQKEGG VEDLEMYRTF NMGMGFLVIL
PEKDAAKAAK ITGGKIVGKI VESGIRVKDL VIE