Gene Mbar_A0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0672 
Symbol 
ID3625625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp802306 
End bp803931 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content44% 
IMG OID637699565 
Producthypothetical protein 
Protein accessionYP_304231 
Protein GI73668216 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.56816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGTG GAGTTGCAAT TGACCTTGGA ACAAGTGGAT ATCGAGCTCA AAAAATCGAT 
CTTGATACAG AAGAGATCCG AAGAACAGTG ATAACTTTGA GGAATCCTCT TCCTGGAGCG
AATGTAATGG ATCATATGGA TTTCGCAATC CACTATGGCC AGGATCTCGC ACATGGACTT
TCTATAAATG CAGTAAAGAA CCTATTCCAG GCTCTTGATG TGAAATGCGA AGAACTTGAA
AGGCTTTCAA TATGTGGAAA CCCAATTCAG CTATCCATCT TTCAGGGGAT AAACATTGAA
GATCTGGCCT ATGCAGGAGA ACGGAAGAAA AAGAAGTACA ATATACAGGA GCAGGACAGA
AGCGCGAGAA TCGTACATAG CAGCGAAATT CCCGAGCTTG ATGAATATGA CTGTGAAATC
GTAGTTCCTC CTGCAATAAA ACATGAAGTT GGGGCCGATG CCCTTGCCCT GATAATAAAA
TCCGGAATGC TCGATAGCGA CGAAATTTCA ATTGCCACGG ACTACGGAAC AAATGCAGAG
ATGGCTCTCA AAGTGAAGGA TATTATTTAT ACGGGATCTG CAGCTGCTGG CCCTGCCCTT
GAAGGACAGC AGATAAAACA TGGAAACCTT GCGTCTCCTT ACGTCATATC AGATTTTGAA
CTCGAGAATG GGGGATTAAG GAACTACGTC CTGAGTGAAG AAATGAAACC GGTTCTCGGA
GATATAATAG ATCCGGCAAC CGGAGAAATC CTTGAGGAAG GTCAGATCAA AGCCAAAGGA
ATCACAGGTA CCGGGGTCAT AGCTCTGATA GAAAAAGGAA TTGAACATGG CCTTATAGAG
CTCCCAAAAA TTAAAACTCC GGATGAGCTT ATTCATTTGC AAAACCGAAT GGATTTCTCT
GAAAAAGACC TGAAGGAAGC CGGAAAAGCT ATAGGCGCAA TTCGCGCAGG GCATATTACG
CTCTGTTCGA CCGCAGGTAT CGAAATGGCA GACATTGATA CGGCTTATAT GGCAGGTGCT
GCCGGTACAT ATATGGATGC GGCAAAAGCC CAGAAAATTG GTTTGATTCC GTATGCAACA
GGAAAGATCT CTCAGCTTGG AAACACTTCA CTTGCAGTCG CCCGTGAAAT CTTGCTGTCG
GAAAAGAGAT TGTGGGAGCT TCAGGACATT GCAAGTCAGA TAATAGGCAC ACACATAATG
TTTGCGACTG CTCCGGAATT CCGGGACGTG TATGTTCTTG AACTTGCGTA CTGGGAAGAA
GGTATGCCCT TTAAAATGTT CAAGAAATAT CTCAAAAAGA AAGAGCTTCC AGGCCTAGGA
GACCCGATAC AGAATCCCAT CATCGATAAA CGTGTGGAGA GAGATATTCC AGTTCTTGGA
GAAGAAGGAC TTCATGTACT TGAAAGAGTC GGAACCTACA TGACTATGGT TGTCGATTGC
CCCGAGTGCA AAAAGTGTAT TAAAGTCTGT CCAACTGGCG CCATATCAAT TGACGAAGAA
AACAGAATTA TGATAAGCAC TGACTTATGT GAAGGTGCCC ATTGCCAGAA ATGTATCCGA
GCTTGCCCTC CGGAAAAATT TAACTGGGAA AATCTAGAAA TTTTCAAACA GAAGCTGCAG
GAATAA
 
Protein sequence
MRCGVAIDLG TSGYRAQKID LDTEEIRRTV ITLRNPLPGA NVMDHMDFAI HYGQDLAHGL 
SINAVKNLFQ ALDVKCEELE RLSICGNPIQ LSIFQGINIE DLAYAGERKK KKYNIQEQDR
SARIVHSSEI PELDEYDCEI VVPPAIKHEV GADALALIIK SGMLDSDEIS IATDYGTNAE
MALKVKDIIY TGSAAAGPAL EGQQIKHGNL ASPYVISDFE LENGGLRNYV LSEEMKPVLG
DIIDPATGEI LEEGQIKAKG ITGTGVIALI EKGIEHGLIE LPKIKTPDEL IHLQNRMDFS
EKDLKEAGKA IGAIRAGHIT LCSTAGIEMA DIDTAYMAGA AGTYMDAAKA QKIGLIPYAT
GKISQLGNTS LAVAREILLS EKRLWELQDI ASQIIGTHIM FATAPEFRDV YVLELAYWEE
GMPFKMFKKY LKKKELPGLG DPIQNPIIDK RVERDIPVLG EEGLHVLERV GTYMTMVVDC
PECKKCIKVC PTGAISIDEE NRIMISTDLC EGAHCQKCIR ACPPEKFNWE NLEIFKQKLQ
E