Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0038 |
Symbol | |
ID | 3627297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 46039 |
End bp | 47103 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637698929 |
Product | transposase, putative |
Protein accession | YP_303609 |
Protein GI | 73667594 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00111468 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0316372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTATTA CGAAACCTCC ACTTATACCA CTAAATGAAG ATTTCAAATG GCAATTGTTG TCCGAAATAT TAAATGTTTT TGATTTGAGA TTCTGTAAGC AAACTCTTAC AAGGAGGGGC ATTGTGCCCC TCCACAGATC AGTACCTACT ATAAAAATTG TTCTTCTAAG CATGTTTTTT TCTTGTGAAA TCTCTTATGC TATAAAGGAA TTAAAAGAAA GAGAAATCTT GAGAAACTTT TTAAAAATCA GTTTAGTACC AACTGAAAAG GAAGTTTATG GCATTCTTAG TAAGTATGAA CCCCAAGAGT TTACTGCTTT TGTTTTTGAA ATATTGAATG ATTTATGCCC TAAGAGAAAA AATGGATCAA GAGACATTAT TATTGATAGT ACTGACATAA ACCTTAACCT GAACTGGCAC GCTAAAAAGA TTACCAAAGA AAGCCTAAAA AACAAAGAAT ACAAGTGGGG CCATTCAACC CATAGAGGTT TCTTCATTGG TATGAAACTT ACTCTTGCAC TTGATTCTCA AACATTAAAA CCTTTAGCGT TTCTGATTAA TGAAGCAAAT GTAGCAGAAC CTAAAATTTA TCCTGAAATA CTTAAAGAAC TTAAAAGAAA GAGAATAATA AAAGCAGGTG ACGTTATCTA TGCTGATAGA GGATACTATT CCTATGAAAA CTACGTTATA TCTGTAAGAA ATTTTAAGGT AGTACCTTTA ATTTTTCCAA GGAAAAACTG TAATTTTAAG AAACTTTTCA ATATGTTTAG ATATCCTCTG AAAATATTTG ATTTAAGAAG AAATACTGAA AAAGAAATTA AATTCTACAA AGAAATAATT GCAAAGTTTA AAGAGTTAAT AAGCAAATGG AAAGAACTCA GATCTGTAAG GTCAATTATA GAAGATGTAT TCAAAATAGC GAAGAAAGCA TACTCTATGG AGAATTTACA CAGATATACA AGGAGTTCTG TCCAAAAATA CTGTTCTTTA GCTGTACTTT TAGTAGGGGT AACTGTAAAT TACGGTATTA ATGAAAGGAA GGAATTGCAA GCCTTCTCTG AATGA
|
Protein sequence | MIITKPPLIP LNEDFKWQLL SEILNVFDLR FCKQTLTRRG IVPLHRSVPT IKIVLLSMFF SCEISYAIKE LKEREILRNF LKISLVPTEK EVYGILSKYE PQEFTAFVFE ILNDLCPKRK NGSRDIIIDS TDINLNLNWH AKKITKESLK NKEYKWGHST HRGFFIGMKL TLALDSQTLK PLAFLINEAN VAEPKIYPEI LKELKRKRII KAGDVIYADR GYYSYENYVI SVRNFKVVPL IFPRKNCNFK KLFNMFRYPL KIFDLRRNTE KEIKFYKEII AKFKELISKW KELRSVRSII EDVFKIAKKA YSMENLHRYT RSSVQKYCSL AVLLVGVTVN YGINERKELQ AFSE
|
| |