Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0016 |
Symbol | |
ID | 3627602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 19391 |
End bp | 20368 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637698908 |
Product | hypothetical protein |
Protein accession | YP_303588 |
Protein GI | 73667573 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.054001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0319641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAC TCCAGAACTG GATCAAAGCG AAAACTCTAA TCCTTACTCA CGGAGATTCG GATGGGATAT GTTCAGGTGC GATTGCAAAA ACCGCTTATC CGGATGCGTA TGTGTATTTT ACAAATCCGG TTAACCTTCT TGAAAAATTA AGGAGTATAA AGAACGTGAA AACCCTTATT GTTTGCGATA TTGCAATCGA TGAAAGGAAC TGTTCCGAAC TTCACGCAGC ACTCAGAGGA TTTGCGGAGA AGTGTACCCT TTACTATATC GACCACCATC CTCTCCCGAA AAGCTGTGAA AAAGAAAGCT GGTTCTACCA TGACATCGAA GCCTGTTCCT CAGAATTGAC CTACAGGCTC TTTGAGGACT GCCTGGACAG AGATATGCGG AGGATAGCAA TCTATGGAGC AATTGGGGAT TTCTGCGACA ACACCCCATG TTTAAAAAAC TGGGTCAAAG ATTGGGATAA AAGGAATCTT TATTTCCAGG CCGGAACCCT GACCCAGGCT ATATTATATA AAGGAAGGAA TTACGAATTC AAGAGGAAAC TTCTTGACCC TCTCTCAAAG GACATCATCC CTTCAAATAT TCCAGAGTTG CTTAAACTTG CCAGGGAAGC TGCAATTAAC GAGGAGAGAT TAAGGCTTTT TGTTAAATAT AATGTGGAAG TCCTGGGAAA TAGCGCATAT ATTGTAAATA CAAATAACTC CATTTCAAAG GCAGCGATCT ATGCAGCCTC TTACGGCAGG CGGGAAGTAG GGGTTGCAGC CGAATACCGT GAAAGAAAGG GAGCTTATGA CCTGAGCATC CGCTCCCGAG GAAAGGTCGA CGTAAACCAT ATTCTCCGCT CAGTCGCTCC AAGATTCGGA GGAAGCGGCG GTGGACATCC CCTTGCGGCA GGCGCTCGAA TTCCCGAAGA TTCCCTTAAC GCATTCCTCA GGGCTTTTGA TAAAGAACTT GGAGAAGCAC ATGGGTAA
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Protein sequence | MKELQNWIKA KTLILTHGDS DGICSGAIAK TAYPDAYVYF TNPVNLLEKL RSIKNVKTLI VCDIAIDERN CSELHAALRG FAEKCTLYYI DHHPLPKSCE KESWFYHDIE ACSSELTYRL FEDCLDRDMR RIAIYGAIGD FCDNTPCLKN WVKDWDKRNL YFQAGTLTQA ILYKGRNYEF KRKLLDPLSK DIIPSNIPEL LKLAREAAIN EERLRLFVKY NVEVLGNSAY IVNTNNSISK AAIYAASYGR REVGVAAEYR ERKGAYDLSI RSRGKVDVNH ILRSVAPRFG GSGGGHPLAA GARIPEDSLN AFLRAFDKEL GEAHG
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