| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3076 |
|---|
| Symbol | |
|---|
| ID | 4655012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3408578 |
|---|
| End bp | 3409510 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639813056 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_960337 |
|---|
| Protein GI | 120555986 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.591298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGTT TTCGACTGGA GAACGTCAGC CACCGTTACG ACAAGGCCAC GGTGCTGCAC
GGGGTAGATC TTCGGCTGGA GCCGGGGGAA ATTCTGGGCC TGTTCGGCCA CAACGGGGCG
GGCAAAACCA CCTCGATCAA ACTTATCCTG GGTTTGATGC AGCCCACCGA GGGCAAGGTT
TCCGTGCTTG AAGGCGCGGC TGGCGATCCG CAGGTAACCC AGCACATCGG CTACCTGCCG
GAGAACGTGA TGTTCTACCC GCAACTGACC GGCCGGGAAA TTCTCAGCCA CTTTGCCCGC
CTCAAGGGCG CGCCGCTGAA GCAGGTGCCT GAACTGTTGG AGCAGGTGGG CCTGGGGGAT
GCCATGGACG CCCGCACCAA AACCTATTCC AAAGGCATGC GCCAGCGTCT TGGCCTGGCC
CAGGCTCTGC TCGGCAAGCC CAAATTGCTG ATGCTGGACG AACCCACCGT CGGCCTGGAC
CCGGTTGCAA CGGCGGATCT GTACCGCCTG CTGCGCCAGC TTCGGGATGA GGGGGCCGGA
ATCGTGCTCT GTTCGCATGT ACTGCCGGGG GTCGAACCTT ACATCGATCG CGCTGCGATT
CTGACCGAAG GCGCCCTGAA AGCGTCTGGA GACCTGCCAT CGCTGCGGCG ACAGGCGAAC
ATGCCGGTCA CCCTGACTCT GCAGCCTGCC ACGAGCCTGT CGGCGTTGGA AAAAGCCATT
GACCAGGCCG AGCAGCGCGC CGGATTGATG ATGAAAAGTG AAAACGGACG ATTGCAGGTA
GACGTGAGAC CCCAGGAAAA AATGGAACTG ATCAAGACCT TGATGGCCTC CGGCGAAGTG
GCAGACCTGG GCATCCATCA GCCCAGCCTC GAAGACATCT ACGTGCACTT TATCGGCTCG
GGTGGCCTGG CTCACCGGGG AGGAAGCCAA TGA
|
|---|
| Protein sequence | MNCFRLENVS HRYDKATVLH GVDLRLEPGE ILGLFGHNGA GKTTSIKLIL GLMQPTEGKV
SVLEGAAGDP QVTQHIGYLP ENVMFYPQLT GREILSHFAR LKGAPLKQVP ELLEQVGLGD
AMDARTKTYS KGMRQRLGLA QALLGKPKLL MLDEPTVGLD PVATADLYRL LRQLRDEGAG
IVLCSHVLPG VEPYIDRAAI LTEGALKASG DLPSLRRQAN MPVTLTLQPA TSLSALEKAI
DQAEQRAGLM MKSENGRLQV DVRPQEKMEL IKTLMASGEV ADLGIHQPSL EDIYVHFIGS
GGLAHRGGSQ
|
|---|
| |