Gene MCA1740 details

Gene Information

• Locus tag: MCA1740
• Symbol: sucC-2
• ID: 3104196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1857628
• End bp: 1858797
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170901
• Product: succinyl-CoA synthase, beta subunit
• Protein accession: YP_114179
• Protein GI: 53803924
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0062076
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATATCC ATGAGTACCA GGCCAAGGAG CTGCTCAAGA CCTATGGCGT GCCCGTGCCC 
GACGGCGCCG TTGCCTATTC CGACGCGCAG GCCGCCAGCG TCGCCGAGGA GATCGGCGGC 
AGCCGCTGGG TGGTCAAGGC GCAGATCCAT GCCGGCGGTC GCGGCAAGGC CGGGGGCGTA 
AAGGTCGCCC ACTCCATCGA GGAAGTCCGC CAATACGCCG ACGCCATGCT CGGCAGCCAC 
CTCGTCACCC ATCAGACCGG CCCGGGAGGC TCGCTGGTTC AGCGTCTGTG GGTGGAACAG 
GCCAGCCATA TCAAAAAGGA ATACTACCTG GGCTTCGTGA TCGATCGCGG CAATCAACGC 
ATCACCCTGA TCGCCTCCAG CGAGGGCGGC ATGGAAATCG AGGAAGTCGC AAAGGAAACC 
CCGGAGAAAA TCGTCAAGGA AGTCGTCGAT CCGGCCATAG GCCTGCTGGA CTTCCAGTGC 
CGCAAGGTCG CCACGGCGAT CGGCCTGAAA GGCAAACTGA TGCCCCAGGC CGTCAGGCTG 
ATGAAGGCCA TCTACCGCTG CATGCGCGAC AAAGATGCCC TGCAGGCCGA AATCAATCCT 
CTGGCCATCG TGGGCGAAAG CGACGAATCG CTCATGGTCC TGGATGCCAA GTTCAACTTC 
GACGACAACG CCCTGTACCG GCAGCGCACC ATCACCGAGA TGCGCGACCT GGCCGAGGAA 
GACCCGAAAG AGGTCGAAGC CTCCGGCCAC GGTCTCAATT ACATCGCCCT CGACGGCAAC 
ATCGGCTGCA TCGTCAATGG CGCCGGCCTC GCCATGGCTT CGCTCGACGC CATCACCCTG 
CATGGCGGCC GTCCGGCCAA CTTCCTCGAC GTGGGCGGCG GCGCCTCCCC CGAGAAGGTC 
ACCAATGCCT GCCGCATCGT ACTGGAAGAT CCCAACGTCC GCTGCATCCT GGTCAACATC 
TTTGCCGGCA TCAACCGCTG TGACTGGATC GCCAAGGGCC TGATCCAGGC CTGCGACAGC 
CTGCAGATCA AGGTGCCGCT GATCGTGCGC CTGGCCGGGA CGAACGTCGA CGAGGGCCGC 
AAGATCCTGG CCGAATCCGG CCTCTCCTTC ATCACCGCGG AAAATCTGGA CGACGCGGCC 
GCCAAGGCCG TCGCCATCGT CAAGGGATAA 

 

Protein sequence

MNIHEYQAKE LLKTYGVPVP DGAVAYSDAQ AASVAEEIGG SRWVVKAQIH AGGRGKAGGV 
KVAHSIEEVR QYADAMLGSH LVTHQTGPGG SLVQRLWVEQ ASHIKKEYYL GFVIDRGNQR 
ITLIASSEGG MEIEEVAKET PEKIVKEVVD PAIGLLDFQC RKVATAIGLK GKLMPQAVRL 
MKAIYRCMRD KDALQAEINP LAIVGESDES LMVLDAKFNF DDNALYRQRT ITEMRDLAEE 
DPKEVEASGH GLNYIALDGN IGCIVNGAGL AMASLDAITL HGGRPANFLD VGGGASPEKV 
TNACRIVLED PNVRCILVNI FAGINRCDWI AKGLIQACDS LQIKVPLIVR LAGTNVDEGR 
KILAESGLSF ITAENLDDAA AKAVAIVKG