Gene MADE_03431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03431 
Symbol 
ID6776756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3699356 
End bp3699964 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content49% 
IMG OID642756879 
Productputative TonB2 protein 
Protein accessionYP_002127717 
Protein GI196158228 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGAT ATTTAATCGC ATTTGTTATT TCCCTTGCGA TCACGTTAGG CCTGTTCTTC 
TTGATGCAAT CGCTTATCAA GATGGGTGGC AGCGCCTTAA CTGAACCGCC CAAGGGAAGC
GTGCTTGACT TTGTAAGGGT TAAGCAGGAC GAGCAGGTTG AGAAAAAAGA TCGTAAGCCG
AAGAAGCCAC CTAAGCCAAA AGAGCCACCT CCGCCAATGG AGCAACCTCA AATGGACTCG
CCTTCTCCTG ATGCAGAAGG TACGTCGATG GACTTTGGTG CCGAAGTGGG AGACGACATC
TCTTTAGATG GGGGCTTAGC CCTTGAGTCA GGCGACGGTG AATACCTTCC AATCGTTAAA
GTTGCGCCGG TATACCCACG ACGTGCACTT CAGCGCGGTA TCGAAGGCTT CGTTATTGTG
GAATTTACAG TAACTAAGCA AGGTGCGGTG CGCGACCCCA TTGTTGTAGA AGCGAACCCA
GAAGGTATAT TCGAACAAGC GGCCATTGAC GCTGCAATGA AGTTCAAATA TAAACCTCGT
GTGGTAAATG GCGAAGCAAC AGAGGTTTCT GGTGTGCAAA ACCGTATTAC GTTCCAAATT
GACGGGTAA
 
Protein sequence
MPRYLIAFVI SLAITLGLFF LMQSLIKMGG SALTEPPKGS VLDFVRVKQD EQVEKKDRKP 
KKPPKPKEPP PPMEQPQMDS PSPDAEGTSM DFGAEVGDDI SLDGGLALES GDGEYLPIVK
VAPVYPRRAL QRGIEGFVIV EFTVTKQGAV RDPIVVEANP EGIFEQAAID AAMKFKYKPR
VVNGEATEVS GVQNRITFQI DG