Gene MADE_03369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03369 
Symbol 
ID6778749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3624322 
End bp3624984 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID642756817 
ProductTranscriptional regulator, GntR family protein 
Protein accessionYP_002127655 
Protein GI196158166 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAA AAAGCGAACA AGCCATCACC AATGCCGACC GTACCTTCTT TCAATTAAGG 
AAGGATATCG TTGAGGGCAT CATTCCAGCA GGCAGTAAGC TGAGTGAAAT GGAATTGTCG 
ACAAAGTACG AAGTCAGCCG TGCAGTTATT CGCGAGGCAA TTAATCGCTT AGCCACCTGC 
CATCTTGTCG AACGCAAAGC GAATGTAGGT GCGCGGGTGG TGGAGCTTTC GCCTGCAGGG 
CTTATCCAAC TATATCAAGT GCGCGAAGCG CTAGAAGGTA TGGCTGCGCG CTTAGCCGCT 
CGTTATATGA GTGATGATGA AATTGCCGAC ATGCAGGCGC TGCTAGACAG CCACTTCGAC 
AAAGTTAAAG ATAGCCACAG CTATTATCAA GAAGCCGGCG ATGTAGACTT TCACTACCGA 
ATTGTAACTG GCAGCAAAAA CGATCACCTT ATTAGCGTGC TTATTGATGG GCTCTACCAT 
TTAGTTCGTA TGTACCGCGT ACAGCTTGGT ATGGCAGGAC CTCGGGTAAG CACGGCGTTT 
GATGAGCACA GACACATTGT TAACGCCATT GCCAATCGTG ACGAAGAGTT AGCAGAAATG 
CTCATGCGTC GCCACATTCT TTATTCAAAA AATAATATCG AGAAGAAGCT CAACAATGAC 
TAA
 
Protein sequence
MLVKSEQAIT NADRTFFQLR KDIVEGIIPA GSKLSEMELS TKYEVSRAVI REAINRLATC 
HLVERKANVG ARVVELSPAG LIQLYQVREA LEGMAARLAA RYMSDDEIAD MQALLDSHFD 
KVKDSHSYYQ EAGDVDFHYR IVTGSKNDHL ISVLIDGLYH LVRMYRVQLG MAGPRVSTAF 
DEHRHIVNAI ANRDEELAEM LMRRHILYSK NNIEKKLNND