| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03037 |
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| Symbol | |
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| ID | 6775912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3288108 |
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| End bp | 3288905 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756486 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_002127325 |
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| Protein GI | 196157836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAA CAAGCAACAC TATAGCCTGT GAACATCGTG AAGATGTGTT GAAGAAGCAA
GTAGAACATC AGCCCTTGCA CTTACCCGTG CTATATCAAG ATGAGCATAT TATCGCGATA
GACAAGCCGC CGGGACTGCT AGTCCATAGA AGCCCTATCG ATAAGCACGA AACCGTGTTT
GCTGTTCAGA CGTTAAGGGA TCAAATTGGC CAGCATGTTT TTCCAGCACA CCGTTTAGAT
AGGCCGACTT CCGGCGTTCT GGTATTTAGC TTTAGCGCTG ACACTGCCGC TAAGCTAGGC
AAACAGATGA TGGACAAGCA GGTGGTAAAG CAATACCACG CTATTGTTCG AGGTTTTGTT
CATCACACTG GTTATATTGA TTACGCGCTT AAATATCGCT ATGACAAAAT AGCGGATAAA
CACAAAAGGC CCCAACAGCC GCCGCAGCCT GCTTCTACTA TGTATGAGTC TTTAGCTAAG
TTCGATGTTC CCGAACCTGT GGGTAGATAC CAAAGTGCAC GGTATTCGCT AGTGAGACTT
TCACCCAGTA CGGGACGCAA GCATCAGCTA AGAAGGCATA TGGTACATAT TCGTCACCCT
ATCATTGGCG ATACGACTCA CGGCGATGGC AAACAAAACA AATTTGCTAA AAGCCACTTT
AATTTTACTC ATTTGGCCTT AAGTTGTACT CAGATGGGAT TTTCTCACCC TGTTACTCAA
AAATGGATAA CGATTAATGG TGAGATGCAT AGCGAAATGC GACAATTTAC AGATAGGCTA
GCATCGTTCA AGGTTTAA
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| Protein sequence | MNQTSNTIAC EHREDVLKKQ VEHQPLHLPV LYQDEHIIAI DKPPGLLVHR SPIDKHETVF
AVQTLRDQIG QHVFPAHRLD RPTSGVLVFS FSADTAAKLG KQMMDKQVVK QYHAIVRGFV
HHTGYIDYAL KYRYDKIADK HKRPQQPPQP ASTMYESLAK FDVPEPVGRY QSARYSLVRL
SPSTGRKHQL RRHMVHIRHP IIGDTTHGDG KQNKFAKSHF NFTHLALSCT QMGFSHPVTQ
KWITINGEMH SEMRQFTDRL ASFKV
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