| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02142 |
|---|
| Symbol | |
|---|
| ID | 6775958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2309852 |
|---|
| End bp | 2310358 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642755580 |
|---|
| Product | Thioredoxin related protein |
|---|
| Protein accession | YP_002126436 |
|---|
| Protein GI | 196156947 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0646766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTAT TAAAAGCAAA GGCCAATACA AACAAACTAA AGCCGCTTTT AACTCTGCTG
TTATTAGTGA CGGCGGCCAT GGGCGGGATT TTTACGTATC AGCACCTTCA GCATGATTTT
GAAACCTTAG AAGGGCGAAC ATATAGCTGG AGCACACTAA AAGGCCAGTG GGTTGTAGTA
AACTATTTCG CTCCTTGGTG CGCACCGTGT TTACGAGAAA TGCCGGAACT TGCTAAATTT
AATGCATCAC TGCCAAGCAA TACTAAGCTC TTCGCTGTTA ACTACGACCT GAAAACACTC
TCTGAGCTAA AAGAGATGAC AGAAAAATAT AATATTACCA TTCCGGTTAT AGTGAGTTCA
CAGAGTACGG CGCTTCCTAT GGAGAAACCG CCCTATTTGC CGGCCACTTT TATTATAGGG
CCAGAGGGGA AGGTCGTTGA CACTATAATG GGTGAATTAA CCGCTGCGCA TTTAACTCAG
CGCCTTCAAG CTTTAAGGCG CGAGTAA
|
|---|
| Protein sequence | MGLLKAKANT NKLKPLLTLL LLVTAAMGGI FTYQHLQHDF ETLEGRTYSW STLKGQWVVV
NYFAPWCAPC LREMPELAKF NASLPSNTKL FAVNYDLKTL SELKEMTEKY NITIPVIVSS
QSTALPMEKP PYLPATFIIG PEGKVVDTIM GELTAAHLTQ RLQALRRE
|
|---|
| |