Gene MADE_01560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01560 
Symbol 
ID6777963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1673362 
End bp1674150 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content44% 
IMG OID642754991 
Productlipase-related protein 
Protein accessionYP_002125858 
Protein GI196156369 
COG category[I] Lipid transport and metabolism 
COG ID[COG3675] Predicted lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TGAAACGCTA TCAATACGAA CGATATGCCA TCCTCTGTCA ACTCGCCTAC 
CCCGATGCCG ACGCACAATA TCAGAAAATA CTAGACCCTT TTCATGAACG TCAACTGGTC
GACAAATACG GCAGAATGAG CGTAAGAATA TTGTGGGTAG AAAACAAAAA AGAAGTCATT
ATTGTTTTTC GAGGTTCGTT AGGTTTTAAA GACTGGTTCG CTAATTTGTT TTTCATACCC
TATAGATTAC GTCAGTTGAA CAGAAGCTTT TTTGTTCACT GGGGTTTTGC GAGACTACTT
GCTCAGCCGA TGTATTCAAG TACAAAGACC TCAGAGGACG CCTTACCGCT AAGAGAGTTA
CTCGTTAAAG TACTAGAGCC ACTTCGCGCC CAAGGTAAAC GCTTTTCGTT TATCGGCCAT
TCATCAGGCG GAGCGGTTGC TGTGCTCATG GCCGATTATT TCCAAAGGCG AGACCCTAAG
TCGGTAAAAA GAGTGGTGAC TTTCGGCCAA CCGGCGGTGG GCACGCGCTC GTGGTACAAA
CATTACACGC TACACCACAG GACCTACCGT ATTTGCTGCG ACTTAGACGT AATCACCTTT
ATGCCGCCCT TCCCTTTTTA CTTTTGGCAC GTAGGTAAAA TGCTTTGGTT GCACGACGAC
AAAATATATG AAAACACACC CACGCATAGG CGCTTTTTTA TATCCCTTCA AAGTTGGTTG
TTGCGCCCTA TTACCTACCA CTACATGCGA AAATATATCC GTAACAAGAC ATTGTTTGAC
GAGCATTAA
 
Protein sequence
MKKLKRYQYE RYAILCQLAY PDADAQYQKI LDPFHERQLV DKYGRMSVRI LWVENKKEVI 
IVFRGSLGFK DWFANLFFIP YRLRQLNRSF FVHWGFARLL AQPMYSSTKT SEDALPLREL
LVKVLEPLRA QGKRFSFIGH SSGGAVAVLM ADYFQRRDPK SVKRVVTFGQ PAVGTRSWYK
HYTLHHRTYR ICCDLDVITF MPPFPFYFWH VGKMLWLHDD KIYENTPTHR RFFISLQSWL
LRPITYHYMR KYIRNKTLFD EH