| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01090 |
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| Symbol | |
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| ID | 6776143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1159935 |
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| End bp | 1160936 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642754527 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | YP_002125398 |
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| Protein GI | 196155909 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0160657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATCA ACGCCTATTG GAGGCAGCTT GGAATGCAGT CATCTATGTT AAGCAAAAAT
AAAACCGTAA ATTCTCCCCT TAAATTATTC AATTTCTACA AAGACAGCTC ATTGGGCAGG
ATGATTAATT TTATAAACGA AGCGGTTATA GTAGTAAACG CCAATGGCAC AATTGAGATG
GTGAACGCAA ATGCGTCCGC GCTAATAGGT CAGACACGTG AAGTATTACT AAGTGAAAAC
TTGCTGAGCT TTTTTTCTGA TGACACAGGC AAAGTGCAAA GCCACGTGAT TCAGTGTTTA
GATAGTTCTG AGAGCGAAAC TATAGAGTCA CCGCCATTTG AAGTTGTTAT CAAACAACAA
AATAAACCGT ACCATAATGT CAGTGTTGAG ATTTCAATTT CCTCTCTTCC GGAAGAGCTT
TCTGCCAACA ACTCTTTATT CATTTGTATC TTACGAGACT TGACGCTACA TAAAGCCGAG
TATGCAACGT TAAAGAAAAA AGCGGAAACT GACTTTTTGA CTGGCCTAGC AAATCGCCAT
AAGTTTTCAG ATTACCTAAC TCGTCAGTGG ATTCTATGCA ATAGTAATAA TTTACCGATA
AGTCTTATTC TTATTGATAT AGATCACTTT AAGTTGTTCA ACGATGAGTA TGGGCATATT
GCTGGAGACC GTTGTCTAAA ACGAATAGGT GATCTACTTG ACTTAAGCAT GCCAAATCGA
GATACGCTTG CGGCTCGTTA TGGTGGTGAA GAGTTTGCAA TAGTACTGCC GAATTGTTCT
GCCCAAACGG CGCAACTTTT AGCAATAAGG ATTAAAAGGC ATTTGGCGCA ATTAAGTTCA
AGGCACTTTG TTTTCTCATC GAATAGTAGG CTTACTGTTA GTATGGGCGT AGCGACTAAT
GAAAATCACC GCTATGAAAG TAAAGAGTCA CTGTTAAACG CAGCGGATAC CCTTCTTTAT
CAAGCAAAAG CGCAGGGGAG AGATCAAATT TGTTACCTCT AG
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| Protein sequence | MQINAYWRQL GMQSSMLSKN KTVNSPLKLF NFYKDSSLGR MINFINEAVI VVNANGTIEM
VNANASALIG QTREVLLSEN LLSFFSDDTG KVQSHVIQCL DSSESETIES PPFEVVIKQQ
NKPYHNVSVE ISISSLPEEL SANNSLFICI LRDLTLHKAE YATLKKKAET DFLTGLANRH
KFSDYLTRQW ILCNSNNLPI SLILIDIDHF KLFNDEYGHI AGDRCLKRIG DLLDLSMPNR
DTLAARYGGE EFAIVLPNCS AQTAQLLAIR IKRHLAQLSS RHFVFSSNSR LTVSMGVATN
ENHRYESKES LLNAADTLLY QAKAQGRDQI CYL
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