| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01029 |
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| Symbol | |
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| ID | 6776157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1088838 |
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| End bp | 1091033 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754461 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_002125337 |
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| Protein GI | 196155848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.539328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA ATCAACATTC AGTGTCGTCG TTTTTCGATA ACTTATTTGG CATTGAAGCC
ATCGACAAAT TCGTGGCAAA AGAATTTGGC TTTATAGAGC AACTGTCTCA AGAGGACGCG
TTTATATGGG CGGGAATATT GGTATACCTG TCGTATATGC AGCGAAATGG ACATAGCTGT
ATCTATTTGA AAGACGTGGC GGGAACCACG CTTTTTGAAG ACGCGGTTGC CTTAGAAAAT
AATGCGTCAG CGCCTTCAGC AAAAAGCAGT GCCAGTGAGC AAAATATGGC TCTCACTCAA
GTCATGGAGC CTAAGGTACA GCAAAATAAA GGGGAAAAAG CGCCTAAAAC AGGCTTTGAG
GTACCAGAGT TAACGCCTTT GCTTAAAATA GTGAAAAGCG CCCTTGGCAA CGAGCAATTA
GCCAAGCTTT TCGTATACGA CAATGGCAGA CTTTATAGCC GCCGGTACTA TGAATTTGAA
CAAGAAGTGG CGAGAAGCGT AGTAGAACGC GCAGTACTTC ACCCTTTACA TGATGACGTA
GCCGACAACG TAAAAGCCTT GTGGCCTGCT ATATTTCCTA CCACCACTAC AGATCAACAA
GACTGGCAGC AAATAGCGGT AGCCAAAAGT TTAATGCAGC GATTTTGCGT AATAAACGGC
GGGCCGGGTA CAGGTAAAAC CTACACCGTG CTGCGTTTAT TACTTGCGCT ACAGGCCTGC
GATGAAGAGC TAAAAATTGT ACTGGCAGCC CCTACGGGCA AAGCGCAGCA GCGTATGACT
GAGTCTATCA TGAATAGCGT AGAAGGGCTT CGCGGTAAGG TAAGCGATAC CGCGCTTGAT
AGTGTGCCTA CAGAGGCCGT TACCCTGCAT AGGTTGTTAG GACTCAGAGA ACATGGCGTT
GCGACAAAGT ACAATCAACA CAACAAACTA TCTGCCGACG TACTTATTGT TGATGAAGCC
AGTATGGTTG ATTTAGCCCT AATGACGCGC ATAGTTCGGG CGTTACCTGA CCACGCGCGG
TTATATTTCA TTGGTGATGC TGATCAGCTT CCAGCGGTTG AGCTAGGCAA TGTGCTTGAA
CAGTTAGTTA GCGATGAAAC TGCGCTGGAT TTTTCTCACG AAAACCCATT AGCCGGCGGT
GAAAACAGTA GTAATGAGCG TACACTTGGC GGTGTACCTT CTTCAATGCG ACAGCATATT
GCCACGCTTT GCCCGCATTT GCCTCTGTTA CCTGTAAATG AACAGGCAAA AAGCTACGTA
GCAACGTTGC AAGCGCCGCA ACGCTTTAAA GGGCAGGTGG CTCGGGTGGC AACGGCAATT
CAGCGCGGCG ATGCGAACGG TGCGCTTGCT GCTATTGCAC AAAAGAATAG TGGCAGTAAG
CAAGGCGATA ATGCTTCACA GCCGAAAAGC GCTGATGAAA AAAGCATCAA TACTAATAGC
CGCTCACGTT TACAGCCTGG TGTTCACTTA TGGCCAGAAA GTCAACTTGG TGGTCGTGAG
CTACAGCAGC TAGCGAAAGA GAGCTTCTTA CCCCTATTTG AAGCCCAAAG TGCAGAGGAG
GCGCTCAACC GCCTTAATTA CGTTAGGTGG TTAACCCCTA TACGTAAAGG CGCCATGGGG
GTGGAAGGTT TGAATAACTT GGTGTTCGAT GCCATTAAGC ACAAGATCAG GCGACGTGAG
GGACACTTCT ATCAAGGTCA GCCTATTATG ATTGTAAAAA ATCATCATCC ACAGCGTTTG
TCCAACGGCG AGGTAGGTGT AATTTGGCCG GATAGCACGG GCAAATTGTA TGCGTGGTTC
TACCAGGATA CGTATGTCGA AGGACAACAA GCAGGCAAGA GCTTGAACGA TAGCTCAAAT
AACAGTAGCG CGCAAAATCT AGGGCAACAG AAGCAAGCGC TACGCAGCAT ATCGCTATCA
AGAGTACCGC AGTTTGAAAC CGTGTATGCC ATGACTATTC ACAAGTCTCA GGGCTCTGAG
TTTAATCACG TTGTGCTTAT TTTGCCCAAA CCCGAAAGCG AAAAAGCCGC TAACCTGTTT
CACCGGGGGT TAGTCTATAC AGGGTTAACG CGGGCAAAAG ACGGGTGCTT AATTATTTCC
GATAGCAATA CATTCAGCGG CATGGTGGCA ACGGTTGATA AACGCTATTC AGGCTTATCT
AGCGCAATAA GCCGATGCGC TGAAAAAGTA CTCTGA
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| Protein sequence | MNNNQHSVSS FFDNLFGIEA IDKFVAKEFG FIEQLSQEDA FIWAGILVYL SYMQRNGHSC
IYLKDVAGTT LFEDAVALEN NASAPSAKSS ASEQNMALTQ VMEPKVQQNK GEKAPKTGFE
VPELTPLLKI VKSALGNEQL AKLFVYDNGR LYSRRYYEFE QEVARSVVER AVLHPLHDDV
ADNVKALWPA IFPTTTTDQQ DWQQIAVAKS LMQRFCVING GPGTGKTYTV LRLLLALQAC
DEELKIVLAA PTGKAQQRMT ESIMNSVEGL RGKVSDTALD SVPTEAVTLH RLLGLREHGV
ATKYNQHNKL SADVLIVDEA SMVDLALMTR IVRALPDHAR LYFIGDADQL PAVELGNVLE
QLVSDETALD FSHENPLAGG ENSSNERTLG GVPSSMRQHI ATLCPHLPLL PVNEQAKSYV
ATLQAPQRFK GQVARVATAI QRGDANGALA AIAQKNSGSK QGDNASQPKS ADEKSINTNS
RSRLQPGVHL WPESQLGGRE LQQLAKESFL PLFEAQSAEE ALNRLNYVRW LTPIRKGAMG
VEGLNNLVFD AIKHKIRRRE GHFYQGQPIM IVKNHHPQRL SNGEVGVIWP DSTGKLYAWF
YQDTYVEGQQ AGKSLNDSSN NSSAQNLGQQ KQALRSISLS RVPQFETVYA MTIHKSQGSE
FNHVVLILPK PESEKAANLF HRGLVYTGLT RAKDGCLIIS DSNTFSGMVA TVDKRYSGLS
SAISRCAEKV L
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